Starkeya sp. ORNL1: G3545_17285
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Entry
G3545_17285 CDS
T06785
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
star
Starkeya sp. ORNL1
Pathway
star03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
star00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
G3545_17285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
star03400
]
G3545_17285
Enzymes [BR:
star01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
G3545_17285
DNA repair and recombination proteins [BR:
star03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
G3545_17285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
CDH1_2_SANT_HL1
YhaL
SKA2
Motif
Other DBs
NCBI-ProteinID:
QJP15247
LinkDB
All DBs
Position
3643537..3643782
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AA seq
81 aa
AA seq
DB search
MTDASDVKTLSFEKALAELETIVGKLESGNVPLEESITLYQRGEALKARCDALLKDAEAR
VEKITLSADGKPAGTVPLDGE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcttcggatgtgaagacgctgagcttcgagaaggcgctggccgagctcgag
acaatcgtcggcaagctggaaagcggcaatgtcccgctggaggaatcgatcacgctctat
cagcgtggtgaagccctgaaggcgcggtgcgacgcactgctgaaagacgccgaggcccgc
gtcgagaagatcacgctcagtgccgacggcaagccggccggcaccgtgccgctggatggc
gagtga
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