Starkeya sp. ORNL1: G3545_17515
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Entry
G3545_17515 CDS
T06785
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
star
Starkeya sp. ORNL1
Pathway
star03030
DNA replication
star03430
Mismatch repair
star03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
star00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3545_17515
03430 Mismatch repair
G3545_17515
03440 Homologous recombination
G3545_17515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
star03032
]
G3545_17515
03400 DNA repair and recombination proteins [BR:
star03400
]
G3545_17515
Enzymes [BR:
star01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3545_17515
DNA replication proteins [BR:
star03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G3545_17515
DNA repair and recombination proteins [BR:
star03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G3545_17515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_5
AAA_14
AAA_19
AAA_18
AAA_30
RCF1-5-like_lid
AAA_assoc_2
DUF815
nSTAND3
TsaE
Rad17
AAA_28
AAA_24
DEAD
SRP54
SKI
DAP3
CbiA
Motif
Other DBs
NCBI-ProteinID:
QJP15287
LinkDB
All DBs
Position
complement(3691864..3693705)
Genome browser
AA seq
613 aa
AA seq
DB search
MSEGAAPDDDAPGFALPGLDVPAIAAPYRVLARKYRPQSFDDLIGQEAMVRTLKNAFASN
RIAQAYILTGVRGVGKTTTARILARALNYEPPEGGGAPTLDMPVLGRHCRDIIESRHVDV
QEMDAASNTGIGDIREIIEAARYKPVLARYKVFIIDEVHMLSTAAFNGLLKTLEEPPEHV
KFIFATTEIRKVPVTVLSRCQRFDLRRVDAGVLAGHLRTICEAEHVSVAPEALGLVARAA
EGSVRDALSLLDQAIAHGSGTVHADEVRSLLGLADKARVIDLFEALMKGDIGAALTELRE
QYDAGADPAVAISDLAEFTHFVTRLKIIPETATDPSLIEAERVRGADFASRLSMRVLARA
WQMLTKGLAEVQQAAKPMQAAEMVLVRLAYAADLPTPDEALRRLKEDASNGEGTPSAQRP
APPSGPSASSGGGARLALATQNSAPRPQPVERAPEPVPAGPRLSTMVDLAALASAQRDLR
MKHAIENQMRPVAFEEGRIEIALVPGASPALVQELQNKISNWTGRRWLIALSQQEPAEPT
LAEQKDAEHASMMTGVRADPLVAAVLERFPGASIVDVRTRLSEEAAPEMSPEEYEGLVAA
LNEGPGPDDEIEF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagggcgccgctcctgatgacgacgcccccgggtttgcattgcccgggctggat
gtgccggcaatcgccgctccctatcgcgtgctcgcccgcaaataccgtccgcagagcttc
gatgacctgatcggccaggaagcgatggtgcgcacgctgaagaacgcgttcgcctccaac
cgcatcgcgcaggcctatatcctcaccggcgtgcgcggcgtcggcaagaccaccaccgcc
cgcatcctcgcccgcgctttgaactatgagccgccggaaggcgggggcgcccccacgctc
gatatgccggtgctcggccggcactgccgtgacatcatcgagagccgccatgtcgacgtc
caggagatggacgccgcctccaataccggcatcggcgacattcgcgagatcatcgaggcg
gcgcgctacaagccggtcctggcgcgctacaaggtcttcatcatcgacgaagtgcacatg
ctctccacggcggccttcaacgggctcttgaagacgctcgaagagccgcccgagcatgtg
aagttcatcttcgccaccaccgagatccgcaaggttccggtgactgtgctgtcgcggtgc
cagcgcttcgatctgcgccgggtcgatgccggcgtgctcgccgggcatctgcgcacgatc
tgcgaagcggagcatgtgagcgtcgcgcccgaggcactcggcctcgtcgcccgcgccgcc
gagggctcggtgcgcgacgcgctttcgctgctcgaccaggcgatcgcgcacggtagtggt
accgtgcatgctgacgaggtgcgttcgctgctcggccttgccgacaaggcccgcgtcatc
gacctgttcgaagcgctgatgaagggcgatatcggcgccgcgctgaccgagctgcgcgag
caatatgacgccggtgccgatccggcggtggcgatctccgacctcgccgaattcacccat
ttcgtcacgcggctgaagatcatcccggagaccgccaccgatccctcgctgatcgaggcc
gagcgggtgcgtggcgcggatttcgcgtccaggctttccatgcgcgtgctggcgcgggcc
tggcagatgctgaccaagggcctcgccgaggtgcagcaggcggccaaacccatgcaggcg
gcggagatggtgctggtgcgcctcgcctacgccgccgatctgccgacgccggacgaagcg
ctgcgtcgtctgaaggaagatgcatcgaacggcgagggcacaccatccgcacagcgcccg
gcaccgccgtccggcccgagcgcctccagtggtggcggggcgcgtctcgccttggcgacg
cagaattcggcgccgcggccgcagccggtcgaacgcgcgccggagccggtgcccgccggt
cccaggctctccaccatggtcgacctcgcggcgctggcctccgcgcagcgcgatctcagg
atgaagcacgccatcgagaaccagatgcgtcccgttgccttcgaggaagggcggatcgag
atcgcgctggtgcctggcgcctcgccggcgctggtgcaggagctgcagaacaagatctcc
aactggaccggccggcgctggctgatcgcgctgtcgcagcaggagccggccgagccgacg
ctggccgagcagaaggacgccgagcacgcctcgatgatgaccggcgtgcgcgccgatccg
ctggtcgccgcggtgctggagcgctttccgggcgcttccatcgtcgatgtgcgcacccgg
ctcagtgaggaagcggcgccggagatgtcgccggaagagtatgaagggctggtcgccgcg
ctcaatgaagggccgggaccggacgacgagatcgagttctag
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