Starkeya sp. ORNL1: G3545_17915
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Entry
G3545_17915 CDS
T06785
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
star03016
]
G3545_17915 (truB)
Enzymes [BR:
star01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G3545_17915 (truB)
Transfer RNA biogenesis [BR:
star03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G3545_17915 (truB)
Prokaryotic type
G3545_17915 (truB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
DUF6204
Motif
Other DBs
NCBI-ProteinID:
QJP15360
LinkDB
All DBs
Position
3772412..3773380
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AA seq
322 aa
AA seq
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MNAPAEAIEARPPEKKRRPKRDIDGWVLLDKPVGMTSTQAVGAVKWLFSAKKAGHAGTLD
PLASGCLPIALGEATKTVPFVMDSRKVYRFTVRFGVETDTDDAEGKPVATSEVRPTREAI
LDALGAFRGEIQQTPPAYSALKINGERAYDLAREGIVVELAPRTVIVHRLELVAMPDDDH
AVFEAECGKGTYVRSIARDLGRVLGSRGHISALRRTCVGTFEETLLVPLDALRATSEANG
DAAPMEALRPVGIGLETLPALRVSPADAARLARGQSIILRGRDAPIIEGFVAVMASGRLV
ALGEGEGGEVHPRRIFHSGAVG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgcctgctgaggcgatcgaggcccgcccgcccgagaagaagcgccgcccgaag
cgcgacatcgatggctgggtgctgctcgacaagccggtcggcatgacctcgacccaggcg
gtcggggcggtgaaatggctgttctcggccaagaaggccggccatgccggcacgctcgat
ccgctcgcctccggctgcctgccgatcgcgctcggcgaggcgaccaagaccgtgccgttc
gtgatggacagccgcaaggtctaccgcttcaccgtgcgcttcggcgtcgagaccgatacc
gacgacgccgagggcaagccggtcgcgacctccgaggtgcgcccgacgcgcgaggcgatc
ctcgatgcgctcggtgccttccgcggcgagatccagcagacgccgccggcctattcggcg
ctgaagatcaatggcgagcgcgcctatgaccttgcccgcgagggtatcgtcgtcgagctc
gcgccgcgcactgtcatcgtccatcggcttgagctcgtggcgatgccggacgacgaccat
gcggtgttcgaggcggaatgcggcaagggcacctatgtgcgttccatcgcccgcgacctc
ggccgggttctcggctcgcgcggccatatctcggcgctgcgccgcacctgcgtcggcacc
ttcgaggagacgttgctggtgccgctcgatgcactgcgcgccacctccgaggccaatggc
gacgccgcgccgatggaggcgctgcgtccggtcggcatcggcctggagacgctgcccgcc
ttgcgtgtcagcccggccgacgccgcgcggctcgcccgcggacagagcatcatcctgcgc
gggcgcgacgcgccgatcatcgagggcttcgtcgcggtgatggcgtcgggccggctggtg
gcgctcggcgaaggggaaggcggcgaagttcatccgcgccgcatcttccattcgggggcg
gtggggtga
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