Starkeya sp. ORNL1: G3545_18045
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Entry
G3545_18045 CDS
T06785
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
star
Starkeya sp. ORNL1
Pathway
star03030
DNA replication
star03410
Base excision repair
star03420
Nucleotide excision repair
star03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
star00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3545_18045 (polA)
03410 Base excision repair
G3545_18045 (polA)
03420 Nucleotide excision repair
G3545_18045 (polA)
03440 Homologous recombination
G3545_18045 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
star03032
]
G3545_18045 (polA)
03400 DNA repair and recombination proteins [BR:
star03400
]
G3545_18045 (polA)
Enzymes [BR:
star01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3545_18045 (polA)
DNA replication proteins [BR:
star03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G3545_18045 (polA)
DNA repair and recombination proteins [BR:
star03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G3545_18045 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3545_18045 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
Transposase_20
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QJP15383
UniProt:
A0A858WZQ4
LinkDB
All DBs
Position
complement(3802413..3805352)
Genome browser
AA seq
979 aa
AA seq
DB search
MPEHDPLEAGDHVVLIDGSAYIFRAYHALPPLTRTSDKLPIGAVAGFCNMLWKLVRAQGF
TPAPTHLAVVFDKSEQTFRKDIYPLYKAQRPDLPEDLIPQFPLIREATRAFDLACVEQDG
YEADDLMATYAEQAKAKGALVTIISSDKDLMQLVDERVRMYDPMKDKPIGTAEVFEKFGV
APDKVIDVQSLAGDSVDNVPGVPGIGVKTAAQLLAEYGDLDTLLARAEEIKQPKRRESLV
NFADQARLSRELVTLKRDVALDVPLADIAVVDPEARRLVAFLKAMEFTTLTRRVGEAYGI
EIGEIEADPKLKAGASPDGVILGLVPEPHESGALPTVDGAAAEEPSLTPQSLATARVLEA
TNTPVDRSKYETVTTLARLNEWIARAFDLGHVALDTETTGLDAMAVDLVGVSLATAPNEA
CYIPLAHRGGGDGLFAEGLLPDQIPIRDALAALKPLLEDPSVLKIGQNLKYDWLILMRHG
IDVAPYDDTMLLSYVLDAGASPHGMDPLSERWLKHTPIKYEEVCGKGKGQICFDQAAIDK
ATAYAAEDADVTLRLWLVLKARLVAEGKVSVYETLERPLVAVLGNMERRGVSIDRQMLSR
LSGEFAQGMARLEAEISDMAGETFNPGSPKQLGDILFGKMQLPGGRKTPTGAWSTGADVL
DELAEQGHALPRRILDWRQLQKLKSTYTDALPTYVNKETGRVHTSFALAATTTGRLSSSE
PNLQNIPVRTEEGRKIRRAFIAQPGYRLVSADYSQIELRLLAEIADTPSLRQAFQDGLDI
HAMTASEMFGVPIEGMPGEVRRRAKAINFGIIYGISAFGLANQLSIPREEAGAYIKRYFE
RFPGIRGYMDETRAFARAHGYVETLFGRRCHYPDINAKNPSIRAFNERASINARLQGTAA
DIIRRAMARMDAALSKAKLNARMLLQVHDELIFEVPESEIEATLPVITATMEQAPMPAVA
LRVPLKVDARAADNWEEAH
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcacgaccccctcgaagccggcgaccatgtcgtcctgattgacggctccgcc
tatatcttccgcgcctatcacgcgctgccgccgctgacccgcacctcggacaagttgccg
atcggcgcggtcgccggcttctgcaacatgctgtggaagctggtgcgggcgcagggcttc
acgccggcaccgacccacctcgccgtggtgttcgacaagtccgagcagacctttcgcaag
gatatctacccgctctataaggcgcagcgccccgacctgccggaagacctcatcccgcaa
ttcccgctgatccgcgaggcgacgcgggcgttcgacctcgcctgcgtcgagcaggacggt
tacgaggccgacgacctgatggcgacctatgccgagcaggccaaggccaagggcgcgctc
gtcaccatcatctcctccgacaaggacctgatgcagctcgtcgatgagcgggtgcgcatg
tacgatccgatgaaggacaagccgatcggcaccgccgaggtgttcgagaagttcggcgtg
gcacccgacaaggtgatcgacgtgcaatcgctggccggcgacagcgtcgacaatgtgccg
ggcgtgccgggcatcggcgtcaagaccgcggcgcagctgctcgccgaatatggcgacctc
gatacgctgctcgcccgtgccgaggagatcaagcagcccaagcgtcgggaaagtctcgtc
aattttgccgaccaggcgcggctgtcgcgcgaactggtgacgctgaagcgcgacgtcgcg
ctggacgtcccactcgccgacatcgcggtggtggaccccgaggccaggcgcctcgtcgcc
ttcctgaaggcgatggagttcaccaccctgacgcgccgtgtcggcgaggcctatggcatc
gagatcggcgagatcgaggcggatccgaagctgaaggcgggggcttcgcccgacggcgtc
atcctcgggcttgtcccggagccgcacgaatcgggagcgctgccgaccgtggatggcgct
gcggccgaggagcccagcctcaccccgcaatccctcgccaccgcgcgggtgctcgaagcc
accaacaccccggtcgaccgctcgaaatacgagaccgtcaccacgctcgcccgcctcaac
gagtggattgcccgcgcctttgatctcggccatgtcgcgctcgacaccgagaccaccggc
ctcgacgccatggcggtcgacctggtgggcgtctcgctggccacggcgccgaacgaggcc
tgctacatcccgcttgctcatcggggcggcggcgacggcctgtttgccgaagggttgctg
ccggaccagatcccgatccgcgacgcgctggcggcgctgaagccgctgctggaagaccct
tccgtactgaagatcggccagaacctcaaatatgactggctgatcctgatgcgccacggc
atcgatgtcgcgccctatgacgacaccatgctgctgtcctatgtgctcgatgcgggggcc
tcgccgcacggcatggacccgctctccgagcgctggctgaagcacaccccgatcaagtac
gaggaggtctgcggcaagggcaagggccagatctgcttcgaccaggccgccatcgacaag
gccaccgcctatgccgccgaggatgccgacgtcacgctgcggctgtggctggtgctgaag
gcacgcctcgtcgccgagggcaaggtgagcgtctatgagacgctggagcgcccgctggtc
gccgtgctcggcaatatggagcgccgcggcgtctccatcgaccgccagatgctctcgcgg
ctctcgggcgagttcgcgcagggcatggcgcggctcgaggccgagatcagcgatatggcc
ggcgagaccttcaatcccggctcgcccaagcagctcggcgatatcctgttcggcaagatg
cagcttcccggcgggcgcaagaccccgaccggtgcctggtcgaccggcgccgacgtgctg
gacgaattggcggagcagggccatgcgctgccgcgccgcatcctcgactggcgccagctg
cagaagctgaaatcgacctacacggatgctttgccgacttatgtgaacaaggagaccggc
cgcgtccacaccagcttcgcactggcggcgaccaccaccggccggctgtcctcgtccgag
ccgaacctccagaacatcccggtgcgcaccgaggaaggccgcaagatccgccgcgccttc
atcgcccagcccggctaccggctggtctcggccgactattcgcagatcgaattgcggctg
ctggccgagatcgccgatacgccctcgctgcgccaggcgttccaggatgggctcgacatc
cacgccatgacggcgtcggaaatgttcggcgtgccgatcgagggcatgcccggcgaggtg
cgccggcgggcgaaagccatcaatttcggcatcatctacggcatctcggccttcggcctc
gccaatcagctctcgatcccgcgcgaagaagccggcgcctatatcaagcgttatttcgag
cgcttccccggcatccgcggctatatggacgagacccgcgccttcgcccgcgcccatggt
tatgtcgagacactgttcggccggcgctgccactatcccgatatcaacgccaagaaccct
tcgatccgcgccttcaatgagcgcgcctcgatcaatgcgcggcttcagggcaccgcggcc
gacatcatccgccgcgccatggcgcgcatggatgcggcgctgtcaaaggcgaagctcaat
gcccgcatgctgctgcaggtgcatgacgaactgatcttcgaggtgccggaaagcgagatc
gaggcgacgctcccggtgatcaccgccaccatggagcaggcgccgatgccggcggtcgcg
ctgcgcgtacccttgaaggtggacgcgcgggcggcggataattgggaagaggcgcattaa
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