Starkeya sp. ORNL1: G3545_20860
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Entry
G3545_20860 CDS
T06785
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
star02000
]
G3545_20860
Transporters [BR:
star02000
]
Other transporters
Pores ion channels [TC:
1
]
G3545_20860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
STN
CE2_N
Motif
Other DBs
NCBI-ProteinID:
QJP15883
LinkDB
All DBs
Position
complement(4390644..4393196)
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AA seq
850 aa
AA seq
DB search
MKRRVSARRRLLCGASALVLTMAAMSLLHPGAALAQAAAQPQARSWQFNIPAKPLLAALA
DFTALTGVQVVRSSGEALGGSSAPVSGTLTAAQALARLLAGTGLSARFTNASTVVLSRPG
EATRPVGVAPDGSEELDPIDVTANVPPADAPYATPGPVSYISGEQVERLPPTSLGDIFRD
TPGVIATGNRIGASVDLNIRGLQGQNRINVMVDGTRQTNSSYRGYRGSRNEVYIDPDFIG
GVDINKGPYGGAGGVGAMGGVVNMRTIEAGDILKPGAEYGARLKGSLGSNTVTPPGAHSY
DYETSAPDFFNGDAWSGSVAAGLKKDNYEFVAAASRRKAGNYFVGTNGADSFLDDRTGGT
PVERALSPIKPGWEAFNTSQDVASFLTKGKVGWGDGQALELGYIYYNNKYGDYNETLLSF
VGHPTIITPYEQFGLAETTTNTFTSKYTYDPDSDYINFTAHAWVSDVETFSQVLKDFNAV
PEADGKTHIRTYGGDAANISLFDTPLGQLRVNNGAETVYEMADENPVYSYGLQSKNPSGN
RLLLSAFNQSKLEMTDWLALLGGLRYDYYELTPTDQLSDYPAKDGGRLNPSAGVELTLAK
GFQLFGLYTEGWRPPSLRESASLTFATVLPNPDLEPETSKNAEFGTNLLRDDVFIAGDKL
RLKASYFNNNYDNYIIRTRIPDNPSYYTWTNIPRAKFVGYELSGSYDAGKFFVEASFTRY
TDIQFCGEGGVCGFDVASGDYGLVSIPPEYSGTITAGIRLFDEALTLGGRAYFFGERYGG
YRLLGGAVNAPTYWTSNTIVDFFGSYKFNDDVTWDFSLENAFDRYYLDPLSTGLLPSPGR
TMRTSVSWRF
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgtgtctcggcgcgtcggcgcctgctgtgcggcgcctccgcgctggtgctg
acgatggcggcgatgtcgctgctgcatccgggagcagcgctcgcgcaggcggcggcgcag
ccgcaggccagatcctggcaattcaacatcccggccaagccgctgctcgccgcgctggcc
gacttcaccgccttgaccggcgtgcaggtggtgcgctcgagcggggaagcgctgggcggc
tcctcggcgccggtctccggcacgctcaccgcggcgcaggcgctggcgaggttgctcgcc
ggcaccggactttccgcccgctttaccaatgcctcgacggtcgtgctgtcgcggcccggc
gaggccacgcggcccgtcggcgtcgcgccggacggatcggaagaactcgatcccatcgac
gtcaccgccaatgtcccgccggccgacgcgccttacgcgacgccggggccggtgagctat
atttccggcgagcaggtggagcggctgccgccgacctcgctcggcgacatcttccgcgac
acgcccggcgtaatcgcgaccggcaaccgcatcggcgcctcggtggacctcaacatacgc
ggcctgcagggccagaaccgcatcaatgtcatggtcgacggcacccgccagaccaacagc
tcctatcgcggctatcgcggcagccgcaacgaggtctatatcgacccggacttcattggc
ggcgtcgacatcaacaagggtccctatggcggcgccggcggcgtcggcgccatgggcggc
gtcgtcaatatgcgcaccatcgaggccggcgacatattgaagcccggcgccgagtatggc
gcgcggctgaagggcagtctcggcagcaacaccgtcacgccgcccggagcccattcctac
gactacgagaccagcgcccccgatttcttcaatggcgacgcatggtcgggaagcgtcgcc
gccggcttgaagaaggacaattacgagttcgtcgccgcagcctcacggcgcaaggccggc
aattacttcgtcggcaccaatggcgccgacagcttcctcgacgatcgaaccggcgggaca
ccggtcgaacgcgcgttgtcgccgatcaagccgggatgggaggccttcaacacctcgcag
gatgtcgcctcgttcctcaccaagggcaaggtcggctggggcgacgggcaggcgctggaa
ctcggctatatctattacaacaataaatatggtgactataatgagacgctgctgtccttc
gtcggtcatccgaccatcataacgccttatgaacaattcggtcttgccgagacgacgacc
aataccttcacctcgaaatatacctacgatccggacagcgactacatcaacttcaccgcc
cacgcgtgggtctccgatgtcgagaccttcagccaggtgctgaaggatttcaacgccgtg
ccggaagccgacggcaagacccatatccgcacctatggtggcgacgccgccaacatttcg
ctgttcgacactccgcttggacagctgcgcgtgaacaacggcgcagaaacggtctatgag
atggcggacgagaaccccgtctattcttacgggctccagagcaagaacccgagcggtaat
cggcttctgctcagcgccttcaaccagtcgaagctggagatgacggactggctcgccctg
cttggcggcctgcggtacgattattacgagctcacgccgaccgaccaactcagcgactat
cccgcaaaggatggcggccggctcaatccgtcggccggcgtcgagcttactctggcgaaa
ggcttccagctgttcgggctctacaccgagggctggcggccgccgagcctgcgtgaatcg
gcgtcgctgaccttcgcgaccgtgctgccgaacccggacctggagccggagacgtccaag
aatgccgagttcggcaccaacctgctgcgtgatgatgtcttcatcgccggcgacaagctg
cggctgaaggcatcctatttcaacaacaactacgacaattacatcatccgcacgcgcatt
ccggacaacccgtcctattatacatggacgaatattccgcgggcgaagttcgtaggctat
gaattgtccggctcctacgatgccggcaaattcttcgtcgaagccagtttcaccagatac
accgatatccagttctgcggcgaaggcggcgtatgcggcttcgatgtggcctcaggcgac
tacggcctggtgagcattcccccggaatattcgggaaccatcaccgccggcatccgcctg
ttcgacgaggcgctcacgcttggcggccgggcctatttcttcggcgagcgctatggcggc
tatcgcctgctcggcggtgccgtcaatgcgcccacctactggacgtccaacaccatcgtc
gacttcttcggcagctacaaattcaacgacgacgtcacctgggatttcagcctggagaac
gccttcgaccgctattatctcgacccgctctcgaccggcctgctgccctcgcccggacga
accatgcgcaccagcgtgagctggcggttctga
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