Starkeya sp. ORNL1: G3545_22495
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Entry
G3545_22495 CDS
T06785
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
star03032
]
G3545_22495
03400 DNA repair and recombination proteins [BR:
star03400
]
G3545_22495
Enzymes [BR:
star01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G3545_22495
DNA replication proteins [BR:
star03032
]
Prokaryotic type
DNA Topoisomerases
G3545_22495
DNA repair and recombination proteins [BR:
star03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G3545_22495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QJP16173
UniProt:
A0A858X1Q7
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All DBs
Position
complement(4759780..4760814)
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AA seq
344 aa
AA seq
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MRKETLVRRLAGKFDLTIVTPDALTIRREPADDGFAFRDARGRLIRNADEIARLKSLAVP
PAYEDVRYAGDPSAHLQAVGIDAAGRLQYRYHPDWARVREELKARRLDTLTHALPTIRRA
VRRRLAEKEPTRSLAMATVVELVALTALRAGGEAYAKENGTRGATTLLKSNVRIDGEQVT
LTFKGKGGKRIVKHICRPTFAAALTRLMALPGRRLFQYRNGDGAVHAIRAGGVNAFLREL
AGRPISLKDFRTLVASSSALETLALAIPAASARARKAQVVSALSSVAETLANTPAVCRKS
YVHAAVVTAFEDGSLARYADELRSTRSPEGRAKILARIVSRHVD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggaaacgctggtccgcaggctggcaggcaagttcgatctcaccatcgtcaca
cccgacgccctcaccatacgccgcgagcccgcggacgacggcttcgcgtttcgcgatgcg
cgcggccgcctcatccgcaatgcggacgagatcgcgcggctgaaatcgctggcggtgccg
ccggcctatgaggatgtgcgctacgcgggggacccgtccgcgcatttgcaggcggtcggt
atcgatgccgccggccggctgcaatatcgctaccatccggattgggcacgggtgcgcgag
gagctgaaggcccgccggctcgacacgctcacccacgcgctgccgaccatacgccgtgcc
gtgcgccgccggctcgcggagaaggagccgacccgcagcctcgccatggccaccgtggtg
gaactggtggcgctcaccgcgctgcgcgccggcggcgaagcctacgcaaaggagaacggc
acacgcggcgccaccaccttgctcaaatcgaacgtccggatcgatggcgagcaggtcacg
ctgaccttcaagggcaagggcggcaagcgcatcgtcaagcacatctgccgccccaccttc
gccgccgcgctcacgcggctgatggcgttgcccggccgccgattgttccagtaccgcaat
ggcgatggtgcggtgcacgcgatacgcgccggcggcgtcaatgccttcctgcgcgagctc
gcgggccggccgatttcgctgaaggatttccgcaccctggtggcctcttccagcgcgctg
gagacgctggcgctcgccatccccgcggcctcggcccgggcgcgcaaggcgcaagtggta
agcgcgctgtcctcggtcgccgagaccctggccaacacgccggcggtctgccgcaaaagc
tatgtccacgccgccgtcgtcaccgccttcgaggacggcagcctggcgcgctacgccgac
gaattgcggagcacgcgaagcccggaagggcgggcgaagattctggcgcgcatcgtctcg
cggcatgtcgactga
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