Starkeya sp. ORNL1: G3545_23280
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Entry
G3545_23280 CDS
T06785
Name
(GenBank) ABC transporter permease subunit
KO
K11070
spermidine/putrescine transport system permease protein
K11071
spermidine/putrescine transport system permease protein
Organism
star
Starkeya sp. ORNL1
Pathway
star02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
star00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G3545_23280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
star02000
]
G3545_23280
Transporters [BR:
star02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
G3545_23280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF2871
Motif
Other DBs
NCBI-ProteinID:
QJP16302
LinkDB
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Position
complement(4936328..4938052)
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AA seq
574 aa
AA seq
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MTDAVADGVMDLGMAKRNSRSVFDRLRGVPIYVWLLLIVLVPNALLIGTSFLKTSQGFLV
LEPSLVNYTRLYNSSGFWALLARTLRLSFLACVVGALVAYPLAYYVARVVRRNKAIFVVL
IIIPLWISLLMRVFAWRLILGQSGLLNSFLVTSGILDKPSEAFLYTPASVILVFAYISIP
FIFISCLTAFEKIPQALFEASQDAGASAFQTFLHVVWPLTRRGLAIGFSLAFLVTVGDYV
TPSMVGGIDGTTIGVVISSQFGMANNWPYGSALAIVLILSVGAIVGLVLWLCPTRGILQG
DEGVKAAPAHAGAAARIGRVGGIVGSLAAIGFLYAPLILMMIFSFGASELQAFPIAEFSL
RWYQDLVSNTSLLAAARRSLVVGLCVVMFSTLIGTSFALLLHYGRVKGARFCEFALALPL
ATPGVVLGIVMVLGTELASVPSGLMRTIIGQSSFVMPVTMMLVLARLRQLDPSLMEASLD
LGADKWRSLIHVLLPLIRSAIIGGALLGLTLSADDVMVTLFLTGSEQTLPIWVFNQMRFG
FTPVVNALFTLLAILCLAIVLVSTRMGRKERSAA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgcagtcgcggatggcgtgatggatctcggcatggcgaagcggaacagccgg
tcagtgttcgaccggctgcgcggcgtgccgatctatgtctggctgcttctcatcgtgctg
gtgccgaatgcgctgctgatcggaaccagcttcctgaagacctcgcagggcttcctggtg
ctggagccctcactggtgaactatacgcgcctgtataattcgtcgggcttctgggctttg
ctggcgcggacgttgcggcttagcttcctcgcctgcgtcgtgggcgcgctggtcgcctat
ccgctcgcctattatgtcgcccgtgtggtgcggcggaacaaggcgatcttcgtcgtcctc
atcatcatcccgctctggatcagcctgttgatgcgggtcttcgcctggcggctgatcctc
ggccagtccggcttgctcaactcgttcctggtgacgagcggcattctcgacaagccgtcc
gaagcctttctctatacgccggcctcggtcatcctcgtcttcgcctatatttccataccc
ttcatcttcatctcctgcctgaccgcgttcgagaagatcccgcaggcgctgttcgaggcc
tcgcaggatgccggcgcctccgcattccagaccttcctgcacgtggtctggccgctcacg
cggcgcggcctcgccatcggcttctcgctggccttcctggtcaccgtcggggactacgtg
acgccatccatggtcggcggcatcgacggcaccaccatcggcgtggtgatctcgtcgcag
ttcggcatggcgaacaactggccttatggctccgccctcgccatcgtgctgatcctcagc
gtgggcgcgatcgtcggcctggtgctgtggctgtgccccacgcgcggcatcctgcaaggc
gacgagggggtgaaggccgcgcccgcgcatgccggagcggccgcccggatcgggcgcgtc
ggcggcatcgtcggatcgcttgccgccatcggctttctctatgcaccgctgatcctgatg
atgatcttctcgttcggcgcctcggaactgcaggccttcccgatcgcggaattcagcctg
cgctggtatcaggacctcgtcagcaatacgagcctgctcgccgccgcccgccgctcgctc
gtcgtcgggctgtgcgtggtgatgttctccacgctgatcggcaccagcttcgcgctgctg
ctgcactatggccgggtgaagggcgcgcgcttctgcgagttcgcgctcgccttgccgttg
gcgacgcccggcgtcgtgctcggcatcgtcatggtgctcggcaccgagctggcctctgtc
ccatccggcctcatgaggaccatcatcgggcagtcgagctttgtcatgccggtgacgatg
atgctggtgctggcacgcctgcgccagctcgacccctcgctgatggaagcctcgctcgac
ctcggcgccgacaaatggcgcagcctcattcatgtcctgctgccgctgatccgaagcgcc
atcatcggcggcgcgctgctcggcctgacactgtcggccgacgacgtgatggtgacgctg
ttcctgacgggatcggagcagaccttgccgatctgggtgttcaaccagatgcgtttcggc
ttcacccccgtggtcaatgcgctgttcacgctgctggcgatcctgtgcctcgccatcgtg
ctcgtctccacccgcatgggccggaaggagaggagcgcggcgtaa
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