Starkeya sp. ORNL1: G3545_23295
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Entry
G3545_23295 CDS
T06785
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
star03000
]
G3545_23295
Transcription factors [BR:
star03000
]
Prokaryotic type
Helix-turn-helix
Other families
G3545_23295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_2
AAA_5
Mg_chelatase
AAA_16
HTH_7
GAF_2
AAA
HTH_50
HTH_30
AAA_7
MCM
HTH_17
AAA_18
HTH_22
BrxC_BrxD
Motif
Other DBs
NCBI-ProteinID:
QJP16305
LinkDB
All DBs
Position
complement(4940630..4942615)
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AA seq
661 aa
AA seq
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MPDGKGAQLPAAAPRSGSAVDVFAGAPVNLEASWRRCVDRYRFDPTSKQRIVVLSSSELR
EHCEPFEQTLAAAEEELDYIGGPLSDVGFIASVSNMAGLILHYRTDPDSNVDIERAGSLW
GEGIAGTNGVGTCIIERRPTDVQGTQHFFRDFSALSCTSAPILSPDSAMVGVLNFATANP
DVDPSTFRLASGLVRRVAERLSNRLFRMAFRDGIILSGRSGTQGPVLFALDREHFIVGAN
HAARNWLNWQDGALRPAELWTIFDRDPDTLSRVAASGGTISLRRAGRDSLFAIETPSAFA
PAPQRPARQSPGAPSPTAPVKPAARSSTPARADAPPNVEECVGSTATARSQFKLLKRVYG
RGLPVLILGETGTGKDTLARALHQEGGRAERAFVAFNCAAVPETLIDSELFGYGVGAFTG
ARREGSPGRLIEADGGTLFLDEIGDMPLVLQTRLLRVLESGEVSPLGSGKTRTIDVQIIA
ATNQNLKTRVAQGLFREDLYYRLAGVVIQLQPLRDREDFAQLAQRMLDRVAGGEDVRLSE
DALARLARHRWPGNARELKFVLQRAAQICEGGWIRPEDLMLDDEVPRGPESAVPDCAPRP
APTARDSIHAAERTAIADALAKCAGDVVKTADALKISRATLYRKMRQHNLRPQRYVDYDL
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacggaaagggtgcgcaactgcccgccgcggcgccgcgcagcggctcggccgtc
gatgtgttcgccggcgccccggtcaatctggaagcgtcgtggcggcgctgcgtcgatcgc
taccgcttcgatcccacctccaagcagcgcatcgtcgtgctcagctccagcgagctgcgc
gaacattgcgagccgttcgagcagacgctggccgcggcagaagaggagctggactacata
ggcggcccgctgtccgacgtcggcttcatcgccagcgtgtccaacatggccggcctgatc
cttcattaccggaccgatcccgacagcaatgtcgacattgaacgtgccggttcgctgtgg
ggcgaaggcattgccggcaccaatggggtcggcacctgcatcatcgagcgacggccgacc
gacgttcagggcacccagcatttcttccgcgatttctccgcgctgtcctgcacctcggcg
ccgatcctgtcgccggattcggcgatggtcggggtgctcaatttcgccactgccaatccc
gatgtcgatccctccaccttccgtctcgcttccggcctggtgcgccgcgtcgccgaacgt
ctcagcaaccggttgttccgcatggcgttcagggacgggatcatcctgtccgggcgctcg
ggcacgcagggaccagtgctgttcgcactggaccgggagcatttcatcgtcggcgccaat
catgccgcccgcaactggctcaactggcaggacggcgccctacggccggccgagttgtgg
accatcttcgaccgcgatcccgatacgctctcccgcgtcgccgcttccggcggcactatc
agcctgcgccgggcggggcgcgacagcctgttcgccatcgagacgccgagcgcctttgct
cccgctccgcaacgccccgccaggcaatcgcccggcgcgccatcccccaccgcgccagtg
aagccggccgcgcgctccagcacccctgcccgcgccgacgcgcctcccaatgtcgaggaa
tgcgtcggcagcaccgcgacggcacggagccagttcaagctgctcaagcgggtctatggc
cgcggccttccggtgcttatcctcggcgagaccggtaccggcaaggacacgctcgctaga
gccctgcaccaggagggcgggcgcgccgagcgtgcctttgtcgccttcaactgcgcggcg
gttcccgagacgctgatcgacagcgagctgttcggctatggtgtcggcgccttcactggc
gcccgtcgcgagggcagcccgggacggctgatcgaagccgatggcggcaccctgttcctc
gacgagatcggcgacatgccgctggtgctgcagacccgtctgctgcgcgtgctcgaatcc
ggcgaggtgagtccgctcggatccggcaagacccgcaccatcgacgtgcagatcatcgcc
gccaccaatcagaacctcaagacgcgggtggcccaggggctgttccgcgaggatctctat
taccgcctcgccggcgtggtcatccagctccagccgctccgggaccgcgaggacttcgcg
cagctcgcgcaacgcatgctggaccgcgtcgccggcggcgaggacgtgaggctctccgaa
gacgcgctggcgcgtctcgcccgacatcgctggcccggcaatgcgcgcgagctcaaattc
gtcctgcagcgcgccgcccagatctgcgaaggcggctggatccggcccgaagaccttatg
cttgacgacgaggtgcctcgcggtccggaatccgccgttccggactgtgccccgcggccg
gcaccgaccgcacgcgacagcatccatgccgccgagcgcaccgccatcgccgatgcgttg
gcgaaatgcgcgggcgatgtggtgaagacggcggatgcgttgaagatcagccgcgccacg
ctctatcggaagatgcgccagcacaatctgcgtccccagcgctacgtcgattacgacctg
cactga
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