Starkeya sp. ORNL1: G3545_23485
Help
Entry
G3545_23485 CDS
T06785
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
star
Starkeya sp. ORNL1
Pathway
star02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
star00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G3545_23485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
star02000
]
G3545_23485
Transporters [BR:
star02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G3545_23485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QJP16339
LinkDB
All DBs
Position
4977725..4978753
Genome browser
AA seq
342 aa
AA seq
DB search
MNRQLLIGLAAMVAAIAATPASAQEKLVVSTWGGNWKEGVEIIGKEFTKRTGVQVEYITG
GTLDRLAKAKVARANPESDLINTTAHVGYLYHSDGLMEKLDLSKIPNSNDLYPVAKRSDY
TISDYVYVYAPAFRTDLMPKDFKIDSWEVLWGEAVKGKLGLPDFDPSHIIIAATKVAGVA
PADWKKVEPKLLALKPSIKAFYQSDATSQNLMRTGETPVQVLLNINAYHLIKQGMPVKIE
IPKEGAVVGVDVWGINAGSKNKERAQEFINLALDPEMQRQLCEFHKCSPMNSKAKLSPEL
AAMPGIFTSQAQMEKEAIILDDKTYATLLPVWKAWFTENMMH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggcagctattgattggccttgctgcgatggtggccgccatcgcagcgacgccc
gcttccgcccaggagaagctggtcgtcagcacctggggcggcaattggaaggaaggcgtc
gagatcatcggcaaggaattcaccaagcgcaccggcgtccaggtggaatacatcaccggc
ggcacgctggatcgcctcgccaaggcgaaggtcgcgcgggcgaaccctgagtccgatctc
atcaatacgaccgcgcatgtcggctatctctaccattccgacggcctgatggagaaactc
gacctctccaagatcccgaactccaatgatctctatccggtggccaagcgcagcgactac
accatcagcgactatgtctatgtctatgcgccggctttccgcaccgatctgatgcccaag
gatttcaagatcgattcctgggaagtgctgtggggcgaggcggtgaagggcaagctcggc
ctgcccgacttcgatccgagccacatcatcatcgccgccaccaaggtcgcgggcgtcgcc
ccggctgactggaagaaggtcgagccgaagctgctggcgctgaagccgagcatcaaggcg
ttctaccaatccgatgccaccagccagaacctgatgcgcaccggcgagaccccggtgcag
gtgctgctcaacatcaacgcctatcacctgatcaagcaggggatgccggtgaagatcgag
atccccaaggaaggcgccgtggtcggcgtcgacgtctggggcatcaatgccggctcgaag
aacaaggaacgggcgcaggaatttatcaacctcgcgctcgatcccgagatgcagcgccag
ctgtgcgagttccacaaatgctcgccgatgaactccaaggccaagctgtcgccggaactg
gctgccatgcccggcatcttcaccagccaggcgcagatggagaaggaagccatcattctc
gacgacaagacctatgcgacgctgcttccggtgtggaaggcgtggttcaccgagaacatg
atgcactga
DBGET
integrated database retrieval system
