Starkeya sp. ORNL1: G3545_23505
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Entry
G3545_23505 CDS
T06785
Name
(GenBank) porin family protein
KO
K16079
outer membrane immunogenic protein
Organism
star
Starkeya sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
star00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
star02000
]
G3545_23505
Transporters [BR:
star02000
]
Other transporters
Pores ion channels [TC:
1
]
G3545_23505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl
Autotransporter
OmpA_membrane
Porin_2
Porin_4
OMP_b-brl_2
MipA
DUF5777
Opacity
Motif
Other DBs
NCBI-ProteinID:
QJP16343
LinkDB
All DBs
Position
4981972..4982721
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AA seq
249 aa
AA seq
DB search
MHKRLLVANVLAAVLSVGAAHAADLPLKAAPPVVAPAFSWTGFYIGAHGGYGWGRNEWSN
YVDPINGTTVDGPDAEYDIEGGLAGGQIGFNWQINQFVLGVEADASWADINGKGKYSDDT
CLLSNDACETKIDALGTITARLGAAFDRALFYVKGGAAWAHTEYHAGYTQPDDPGFNFSD
QPNETRWGWTIGAGAEYAFADNWSVKIEYNYIELGDDRIEFDYSPQTFGASGEADQHLSI
VKAGINYRF
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcataagcgactgctggttgcgaacgttcttgcggcggtgttgtccgtcggtgccgca
cacgcggcggatctgccgctcaaggcggccccgccggttgtcgcgccggccttcagctgg
accggcttctacatcggcgcccatggcggttacggctggggccggaatgaatggagcaac
tacgtcgacccgatcaacggcacgaccgtcgatgggccggacgcggaatatgacatcgaa
ggcggtctcgccggtggccagatcggcttcaactggcagatcaaccagttcgtgctcggc
gttgaggccgatgcctcctgggctgacatcaacggtaaaggcaagtattccgacgatacc
tgcctgctgagcaacgatgcctgcgaaacgaaaatcgacgcgctcggcaccatcactgcc
cgtcttggcgccgccttcgaccgcgcccttttctacgtgaagggcggcgcagcctgggcc
cacacggagtaccacgccggctacacccaacccgacgatccgggcttcaacttcagcgac
cagcccaacgaaacccgctggggctggaccatcggtgcgggcgccgaatatgcgttcgcc
gacaactggtcggtgaagatcgaatacaactacatcgagctcggcgacgaccgcatcgag
ttcgactacagcccgcagaccttcggcgcgagcggagaagccgaccagcacctcagcatc
gtcaaggccggcatcaactatcgcttctga
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