KEGG   Starkeya sp. ORNL1: G3545_26575
Entry
G3545_26575       CDS       T06785                                 
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
star  Starkeya sp. ORNL1
Pathway
star03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:star00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G3545_26575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:star03019]
    G3545_26575
   03110 Chaperones and folding catalysts [BR:star03110]
    G3545_26575
   03029 Mitochondrial biogenesis [BR:star03029]
    G3545_26575
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:star04147]
    G3545_26575
Enzymes [BR:star01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     G3545_26575
Messenger RNA biogenesis [BR:star03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     G3545_26575
Chaperones and folding catalysts [BR:star03110]
 Heat shock proteins
  HSP60 / Chaperonin
   G3545_26575
Mitochondrial biogenesis [BR:star03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    G3545_26575
Exosome [BR:star04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   G3545_26575
  Exosomal proteins of other body fluids (saliva and urine)
   G3545_26575
  Exosomal proteins of breast cancer cells
   G3545_26575
  Exosomal proteins of colorectal cancer cells
   G3545_26575
  Exosomal proteins of bladder cancer cells
   G3545_26575
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: QJP16890
LinkDB
Position
5672506..5674137
AA seq 543 aa
MAKRILHDIEARRALARGVGKLAAAVEATLGPKGMNAMVDRPIGTPIVSRDGVTIASEIE
LPDRFENMGAQVVREVSMQTNEVAGDGTTTAMVLANGLIQNGVAALERGAKPIDLCRGID
TAVDLVVSTLKDQARPAGERHMLEAVATIAATDAHLGSLVADALERVGRDGIISSEYGLT
IETTLDVVEGMSFDRGYISHHMVTDIEKMEVVLQEPYILLTDLKIRTPEEIAGIRAAVAR
TGRPLMIVAEEIAPDVVVTLLGEGNRGKVLVVNPPDYGHWRKAMMDDLAIITGGRVIARE
LGGRLEDATLEDLGGARQVRASARETVIVRGGGDAEAVAARRAQVTRQHELAPPNIEQDK
LKERLAKLSGGTAIIYAGGVTPVEQKRKIQLIDDALNATRAAAEEGIVAGGGTALLQCAP
IVRAKLGNLNGDVGEGIRLVSETLSRPAAFIARNAGYDPDTVLDRLRSAPAGVGFDASSG
EMTDMISAGIVDPVRVTYTALRNAASVATLVLSTNTLVADIPEHIDPTAGPALGGGAEKL
GRA
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcaaaacggatcctgcacgatatcgaagcccgccgtgcccttgcccggggcgtcggc
aagctcgctgccgccgtcgaggcgacgcttgggccgaagggcatgaacgccatggtcgac
cggccgatcggcacgcccatcgtctcacgcgacggcgtcaccatcgcctcggagatcgag
ctgcccgaccgcttcgagaatatgggcgcgcaggtggtgcgcgaggtctcgatgcagacc
aacgaggtcgccggcgacggcaccaccaccgccatggtgctggccaatggtctcatccag
aacggcgtcgccgcgctggagcgcggcgccaagccgatcgacctgtgccgcggcatcgac
acggccgtggatctcgtcgtcagcaccctcaaggaccaggcccggcccgccggcgagcgg
catatgctggaagcggtggcgacgatcgccgcgaccgatgcccatctcggcagcctggtc
gccgacgcgctcgagagggtcggccgcgacggtatcatcagctccgaatacgggctcacc
atcgagacgacgctggacgtggtcgagggcatgtcgttcgaccgcggctacatctcgcac
cacatggtcaccgacatcgagaagatggaggtagtgctgcaggagccctacatcctgctg
accgacctcaagatccgcacgccggaggagatcgccggcatccgcgccgccgtcgccagg
accgggcgcccgttgatgatcgtagccgaggagatcgcgcccgacgtcgtggtcacgctg
ctcggcgagggcaaccgtggcaaggtgctggtcgtcaacccgccggactatgggcattgg
cgcaaggcgatgatggacgatctcgccatcatcaccggtggccgcgtcatcgcgcgcgag
ctcggcggccggctggaagatgcgaccctggaggatctcggcggcgcccggcaggtgcgc
gccagcgcccgcgagaccgtgatcgtgcggggaggcggcgatgccgaggctgttgcggcg
cggcgtgcccaggtcacccggcagcatgagctcgcgccccccaatatcgagcaggacaag
ctcaaggagcggctcgccaagctgtccggcgggacggccatcatttatgccggcggggtg
acgccggtggagcagaagcgcaagatccagctcatcgatgacgcgctcaacgcgacccgc
gccgcagccgaggaaggcatcgtcgccggcggtggaacggcgctgctgcaatgcgcgccg
atcgtcagggccaaactcggcaatctcaatggcgatgtcggcgagggcattcgcctggtg
agcgagacgctctcgcgtcccgctgccttcatcgcgcgcaatgccggttacgatcccgac
accgtccttgatcgcctcaggtcggcacctgcgggtgtcgggttcgatgcttcctccggc
gagatgaccgacatgatatcggccggcatcgtcgatccggtccgcgtcacctacaccgcg
ctgaggaacgccgcctccgtcgccaccctggtgctgtcgaccaacaccctggtggccgac
atccccgaacatatcgaccccaccgccggtcccgcgctcggcggcggtgccgagaaactc
gggcgcgcctga

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