Starkeya sp. ORNL1: G3545_27620
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Entry
G3545_27620 CDS
T06785
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
star
Starkeya sp. ORNL1
Pathway
star02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
star00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G3545_27620 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
star02000
]
G3545_27620 (xylF)
Transporters [BR:
star02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
G3545_27620 (xylF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
QJP17084
UniProt:
A0A858X803
LinkDB
All DBs
Position
complement(5900220..5901260)
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AA seq
346 aa
AA seq
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MRLSLTISAAALVSVLAVGAARAADTVVGVSWSNFQEERWKTDEAAIKKALAAAGAKYIS
ADAQSSASKQLSDVEALIAQGANALIILAQDSDAIAPAIAKAQAEGIPVVGYDRLIEIPY
AYYITFDNKEVGRLQAAEVQKLKPKGNYLFVKGSAADPNADFLFSGQMEVLKPAIDKGDI
KNVGEAYTDGWLPANAQKNTEQFLTANNNKVDAVVASNDGTAGGAVAALAAQGLAGSVPV
SGQDADFAALNRVALGTQTVSVWKDSRVLGQKAAEIALQLAKGGDPKSIAGTTTFTGGPK
KVAMNSTFLKPVPITKDNLGVIIEAGWVPKATVCQGVAKGKVKACD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagactttcgctgacgatttccgccgccgcgctggtcagcgttctggcggtcggcgcc
gcgcgggccgccgacaccgtggtcggggtaagctggtcgaacttccaggaagagcgctgg
aagaccgacgaggccgcaatcaagaaggcgctcgccgccgccggcgccaagtacatctcg
gcggacgcccagtcctctgcctcgaagcagctctccgacgtcgaggcgctgatcgcgcag
ggcgcgaacgccctcatcatcctcgcccaggattccgacgccatcgccccggccatcgcc
aaggcccaggccgaaggcattccggttgtcggctatgaccggctcatcgagatcccctat
gcctattacatcaccttcgacaacaaggaggtcggtcgcctccaggctgccgaggtgcag
aagctgaagccgaagggcaactacctcttcgtcaagggctcggccgccgatccgaacgcc
gacttcctgttctccggccagatggaagtgctgaagccggccatcgacaagggcgacatc
aagaatgtcggcgaggcctataccgacggctggctgcccgccaacgcccagaagaacacc
gagcagttcctgaccgcgaacaacaacaaggtcgatgccgtcgtcgcctccaatgacggc
accgccggcggcgctgtcgccgcgctcgccgcgcagggccttgccggctcggtgccggtc
tccggccaggacgccgatttcgccgcgctgaaccgcgtcgctctcggcacccagaccgtc
tcggtgtggaaggattcccgcgtgctcggccagaaggcggcggaaatcgcgctccagctc
gccaagggcggcgatccgaagtcgattgccggcaccaccaccttcaccggtgggccgaag
aaggtggcgatgaactccactttcctgaagccggtgccgatcaccaaggataatctcggc
gtcatcatcgaggccggctgggtgccgaaggcgaccgtctgccagggcgtcgccaagggc
aaggtcaaggcctgcgactga
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