Starkeya sp. ORNL1: G3545_28310
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Entry
G3545_28310 CDS
T06785
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
star
Starkeya sp. ORNL1
Pathway
star03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
star00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G3545_28310 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
star03400
]
G3545_28310 (uvrB)
DNA repair and recombination proteins [BR:
star03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3545_28310 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G3545_28310 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QJP17203
LinkDB
All DBs
Position
6025726..6028293
Genome browser
AA seq
855 aa
AA seq
DB search
MPKAARPGGFGERSQRAFEPAHAATLDPKLAEKLGVAPTSGASATVAALSALIETGRPEV
DGQVWMPHRPSRPEKSEGGVPFVIKSDYTPNGDQPHAIDELVVAANQGERDQVLLGVTGS
GKTFTMANVIERVQRPALVLAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVP
RTDTFIEKESSINEQIDRMRHSATRSLLERDDVIIVASVSCIYGIGSVETYASMTFKIAV
GDRIDQRGILADLVALQYKRIQGDFGRGTFRVRGDVIEIFPAHYEDRAWRVSLFGDEVES
IQEFDPLTGQKSQDLKFVKVYANSHYVTPRPTLIQAITGIKNELRHRLEELNAMGRYLEA
QRLDQRCTFDLEMMEATGSCAGIENYSRWLTGRRPGEPPPTLFEYVPDNALIFVDESHVT
VPQIGAMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWEAMRPQTVHVSATPGPWEMDR
TGGVFVEQVIRPTGLVDPPVEVRPARTQVDDLLGEVRATAAKGYRTLVTVLTKRMAEDLT
EYLHENGIRVRYMHSDIDTIERIEIIRDLRLGAFDALIGINLLREGLDIPECALVAILDA
DKEGFLRSETSLVQTIGRAARNVDGRVVLYADHVTGSMERAMAETQRRRDKQVAWNTEHG
ITPESVRKAIGDILNSVYERDHVTVDSGLAEAPAAYGHNLAAVIADLEKRMRAAAADLDF
EQAARLRDEIKRLQATELAISDDPLARQDAIDDRTGGYRGERKYGRAANLPAKGKGGKSG
SSRTGAAIRAEELQAAYDPGENDRSAGSRIVKPSLDDMGPGTDRTEPLGPEGWTRPERPD
PMTKGYKKGGRRSRR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagccgccagacccggcggattcggagagcgctcgcagcgcgccttcgaaccc
gcgcacgccgccacgctggacccgaagctcgccgagaagctcggcgtggccccgacctcc
ggcgcctccgccaccgtcgccgcgctctcggcgctgatcgagaccggtcgccccgaggtc
gacggtcaggtgtggatgccgcaccgcccctcgcgcccggagaagtccgaaggcggcgtg
cctttcgtcatcaagtcggactacacgccgaacggcgaccagccgcacgcgatcgacgaa
ctggtggtcgcggcgaaccagggcgagcgcgaccaggtgctgctcggcgtcaccggctcc
ggcaagaccttcaccatggccaatgtcatcgaacgggtgcagcgcccggccctggtgctg
gcgccgaacaagacgctggcggcgcagctctatggcgagttcaagagcttcttcccggac
aatgcggtcgagtatttcgtctcgtactatgactactaccagccggaagcctacgtcccg
cgcaccgacaccttcatcgagaaggaatcgtcgatcaacgagcagatcgatcgcatgcgc
cactcggcgacgcgctcgctgctggagcgcgacgacgtcatcatcgttgcctcggtgtcc
tgcatctatggtatcggttcggtcgagacctatgcctcgatgaccttcaagatcgcggtc
ggcgaccgcatcgaccaacggggcatattggccgacctcgtcgccctgcaatacaagcgc
atccagggcgatttcggccgcggcaccttccgggttcgcggcgacgtcatcgagatcttc
ccggcgcactatgaggaccgggcctggcgggtctcgctgttcggcgacgaagtggagagt
atccaggagttcgatccgctcaccgggcagaagtcgcaagacctgaaattcgtgaaggtc
tatgccaactcgcattatgtgacgccgcgcccgacgctgatccaggccattaccggcatc
aagaacgagttgcgccatcggctcgaagaactgaacgccatgggccgctatctcgaggcg
cagcgcctcgatcagcgctgcaccttcgatctcgagatgatggaggccaccggttcctgc
gccggcatcgagaactattcgcgctggctgaccggccgccgccccggcgagccgccgccg
acgctgttcgaatatgtgccggacaatgcgctgatcttcgtcgacgagagccacgtcacc
gttccgcagatcggcgccatgtatcgcggcgacttccgccgcaaggcgacgctggcggaa
tacggcttccgcctgccgtcctgcatggacaaccggccgctgcgcttcgaggaatgggag
gcgatgcggccgcagaccgtgcatgtctcggcaacgcctggcccatgggagatggaccgc
accggcggcgtgttcgtcgagcaggtgatccgtccgaccggactggtcgatccgcccgtg
gaagtgcgcccggcgcgcacccaggtcgacgacctgctcggcgaggtgcgggcgaccgcg
gcgaaaggctaccgcacgctggtgacggtgctcaccaagcgcatggccgaggacctgacc
gagtatctgcacgagaacggcatccgtgtgcgctacatgcattcggacatcgacaccatc
gagcgcatcgagatcatccgcgacctcaggctcggggcgttcgatgcgctgatcggcatc
aacctgctgcgcgagggtctcgacatcccggaatgcgcgctggtcgccattctcgacgcc
gacaaggagggcttcctgcgctccgagacctcgctggtgcagaccatcggccgcgcggcg
cgcaacgtcgacggccgggtggtgctctatgccgaccacgtcaccggctcgatggagcgg
gcgatggcggagacgcagcgccgccgcgacaagcaggtggcgtggaacaccgagcatggc
atcacgccggagagcgtgcgcaaggcgatcggcgacatcctcaacagcgtctatgagcgc
gaccacgtcacggtggattcgggactggccgaagcgcccgccgcctatggccacaatctg
gcggcggtgatcgcggatcttgagaagcgcatgcgcgcagcggcggcggatctcgacttc
gagcaggcggcgcggctgcgcgacgagatcaagcggctgcaggccaccgagcttgccatc
tctgacgatccgctggcgcggcaggacgccattgacgaccgcaccggcggctatcgcggc
gagcgcaaatatggccgcgccgccaaccttccggcgaaagggaagggtggcaaatccggc
agctcccgcaccggtgcggcgatccgcgccgaggaactccaggccgcctatgatcccggt
gagaatgatcggtcggcgggctcgcgcattgtcaagccgtcgctggacgatatgggcccc
ggcaccgaccgcaccgagccgcttggccccgaaggctggacccgcccggagcgaccggac
ccgatgaccaagggctacaagaagggcggacggcgcagccggcgctga
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