Starkeya sp. ORNL1: G3545_28760
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Entry
G3545_28760 CDS
T06785
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
star
Starkeya sp. ORNL1
Pathway
star02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
star00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G3545_28760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
star02000
]
G3545_28760
Transporters [BR:
star02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
G3545_28760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QJP17283
UniProt:
A0A858X4K1
LinkDB
All DBs
Position
6127288..6130389
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AA seq
1033 aa
AA seq
DB search
MSISSWFIRHPIGTSLLMAGILMVGAACFPFLPVAPLPQVDFPTLSISTQLPGASPEIIA
ASVTQPLERQFGEIPGVTQMTSVSTLGNSSITLQFDLDVDINGAAQDVQTAINAAGGQLP
TNLPAPPTYRKVNPADPPILVLSLHSDTLPIIQVDDYAENVLEQHISQISGVGQVSVLGQ
QKPSVRIQVDPAKTANLGLSLEDIRQAIVTTTVNGPKGTVQGQTRTFTIYDNDQLLAAAP
WLDSILAYRNGAPVRVRDIGTAVDAPENEQLAAWADGKPAILLAVFKLPGANVIDTVDRI
KAQLPSLTALAPAALKVDIISDRTGTIRASVQDVEKTLLITIVLVVAVIFVFLRSLWATV
IPSVAVPLALIGTFAAMYALGYSLDNLSLMGLSIAIGFVVDDAIVMIENIERHLEMGKTP
LQAALDGSAEIGFTILSISLSLVAVFIPLLFMGGIVGRLFREFAITVTITIAVSAFVSLT
LTPMMCALFLRPAESRTHGRLYRLSERMFDGLLSAYRTTLDIALDHHRITLCVFLAGVMA
TGTLFYYIPKGFFPQQDTGLLLGVSEAAQDVSFAEMAKHQLALGKVVAADPDVASVGMTI
GSSGGQTMNNGRMFIALKPRDQRSASAFDIIRRLQKPLSKVEGAALFLQAAQDLNVGGRV
ARTQFQYTLQDGDITELNTWAPKLLAKLKALPELTGVATDQQSGGATLTLTIDRDQAERF
GIDPTDIDATLYDAFGQRQVTQYFTQLNSYHVILELLPELQNSPRALEQLYIHSPLTGDQ
VPLSVLAKWTSEPTGFLSINHQGQFPAVTLSFNLAPGVALGDAVAAVHRAEQEIGIPPTL
TGSFQGNAQAFQASLASEPALVLAALLVIYVILGVLYESYVHPLTILSTLPSAGLGALAV
LWAFGFDFSIIALIGIILLIGIVKKNGIMIVDFAIERERGEGMSAHDAIREACLLRFRPI
LMTTMAALLAGVPLMLGTGTGSELRQPLGYAIVGGLIVSQLLTLYTTPVIYLYLDRLGRR
RQDKHAPTVAQGA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatctcctcctggttcatccgtcaccccatcggtacgtcgctgctgatggcgggc
atcctcatggtcggcgcggcctgctttccgttcctgccggtggcgccgctgccgcaggtc
gacttcccgaccctgtcgatctcgacccaattgccgggtgcgagccccgagatcatcgcc
gcctcggtgacgcagccgctggagcggcagttcggcgagattcccggcgtcacgcagatg
acctccgtcagcacgctgggcaacagctcgatcacgctgcagttcgatctggacgtcgac
atcaatggcgcggcgcaggacgtgcagaccgcgatcaacgcggccggcggccagctgcct
accaatttgccggcgccgccgacctatcgaaaggtgaatccggcggatccgccgatcctg
gtgctgtcgctccactcggacacgctgccgatcatccaggtcgacgactatgccgagaac
gtgctcgaacagcatatcagccagatcagcggtgtcgggcaggtctccgtcctcggccag
cagaagccgtcggtgcggatccaggtcgacccggccaagaccgccaatctcggcctgtcg
ctggaagatatccgccaggctatcgtcaccaccacggtgaacgggccgaaaggcaccgtg
cagggccagacgcgaaccttcacgatctatgacaacgaccagctccttgcggcggcgccg
tggctggattcgatcctggcctatcgcaacggcgcgccggttcgggtgcgcgatatcggc
accgccgtcgatgcgccggagaacgagcagctcgccgcctgggccgacggcaagccggcg
atcctgcttgcggtcttcaagttgccgggtgccaacgtcatcgacaccgtcgaccgcatc
aaggcgcaactgccgagcctgaccgcgctggcgcccgcggcgctcaaggtcgacatcatc
agcgatcgtaccggcaccatccgcgcctcggtgcaggatgtcgaaaagacactgctcatc
accatcgtgctggtggtcgccgtgatcttcgtcttcctgcgcagcctgtgggcgacggtg
atcccgagcgtcgccgtgccgctggcgctgatcggcaccttcgccgcgatgtacgcgctc
ggctacagcctcgacaatctctccctgatggggctgagcatcgccatcggattcgtggtg
gatgacgccatcgtcatgatcgagaacatcgagcggcacctggagatgggcaagaccccg
ctccaggccgcgctcgacggctcggccgagatcggcttcaccatcctctccatcagcctg
tcgctggtcgccgtcttcatcccgctgctgttcatgggcggcatcgtcgggcgcctgttc
cgcgaattcgcgatcaccgtgaccatcaccatcgcggtgtcggccttcgtctcgctgact
ttgaccccgatgatgtgcgcgctgttcctcaggcccgccgaaagccgcacccacggtcgg
ctctatcggctttccgagcgcatgttcgacggcctgctgagcgcctatcgcacgacgctc
gacattgcgctcgaccatcaccggatcacgctctgcgtcttcctcgccggggtgatggcg
acaggcacgctattctattacatcccgaaaggcttcttcccgcagcaggacaccggcctc
cttctcggggtttcggaggcggcgcaggacgtgtcctttgccgagatggccaagcatcag
ctcgcgcttggcaaggtggtcgcggcggatcccgatgtagcctcggtgggcatgacgatc
ggctcgtccggcgggcagaccatgaataatggccgcatgttcatcgcgctgaagcctcgg
gaccagcgcagcgcctcggcgttcgatatcatccgcaggctgcagaagccgctgtcaaag
gtggaaggggccgcgctgttcctgcaggcggcgcaggatctcaatgtcggcgggcgcgtg
gcgcgcacgcagttccagtacacgctgcaggacggcgacatcacggagctgaacacctgg
gcgccgaagctgctggccaagctgaaggcgctgccggagctgaccggtgtcgccaccgat
cagcagtcgggcggcgcgacgctgacgctgaccattgaccgcgaccaggccgagcggttc
gggatcgacccgaccgatatcgacgccacgctctatgatgcgttcggccagcgccaggtg
acgcagtacttcacgcagctgaacagctaccacgttatcctcgaattgctgccggagctg
cagaattcaccgcgcgcgctggagcagctctacatccattcgcccttgaccggcgatcag
gtgccgctcagcgtgctcgccaaatggacctcggagcccaccggattcctgtcgatcaac
caccagggccagtttccggcggtgacgctgtctttcaacctcgcgcccggcgtcgcgctg
ggtgatgcggtggcggcggtccatcgcgccgagcaggagatcggcatcccgcccacgctg
accggctcgttccagggcaatgcccaggcgttccaggcctcgctggcgagtgagcccgcg
ctcgtgctcgccgcgctattggtgatctatgtgatccttggcgtgctctatgagagctac
gtgcaccccctgaccatcctgtcgaccctgccgtcggccggtctcggggcgctcgccgtg
ctctgggcgttcggcttcgacttctcgatcatcgcactgatcggcatcatcctgctgatc
ggcatcgtgaagaagaacggcatcatgatcgtcgacttcgccatcgagcgcgagcgcggc
gagggcatgtcggcgcacgacgcgatccgcgaggcctgcctgctgcgcttccgcccgatc
ctgatgacgacgatggcggcgctgctcgccggcgtgccgttgatgctcgggaccggcacc
ggctcggaactgcgtcagccgctcggctatgctatcgtcggcgggttgatcgtgagccag
ttgcttaccctgtacacgacgcccgtcatctatctctatctcgatcgcctgggccgccgc
cggcaggacaagcacgcgcccacggtcgcgcagggcgcctga
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