Staphylococcus taiwanensis: HYI43_06035
Help
Entry
HYI43_06035 CDS
T08434
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stas
Staphylococcus taiwanensis
Pathway
stas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HYI43_06035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stas03400
]
HYI43_06035
Enzymes [BR:
stas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HYI43_06035
DNA repair and recombination proteins [BR:
stas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HYI43_06035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
nSTAND3
AAA_12
HHH_5
AAA
AAA_18
NPHP3_N
Rad17
AAA_28
T2SSE
ABC_tran
TsaE
PIF1
Mg_chelatase
UvrD-helicase
AAA_29
AAA_16
DEAD
AAA_17
NACHT
HHH_3
5_3_exonuc
NTPase_1
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UDI78116
LinkDB
All DBs
Position
1278293..1280743
Genome browser
AA seq
816 aa
AA seq
DB search
MSDPTLFDYSMIKGTVDAILFQNNDNFYTVLKVDTIETNESFGNLPTVVGFFPNIVEGDV
YTFKGQVVEHPRYGKQLKADTFEKEIPQTKDAIVSYLSSDLFKGIGKKTAQNIVNTLGEN
AINDILNDATVLENVPSLPKKKQKQIAEQIQANQESEKIMIRLHDLGFGPKLSMAIYQFY
QSETLQVLEKNPYQLVYDVKGIGFQKADTLARNNGIAFNDQERLKAGLLFTLEEECIKQG
HTYLAYDYVIEVTQEMLSDKRQGETIEHRQLEEVLQNLSEESKLIFDNQRVAIPSLYYSE
LKSVQNLYRIKTYKNKLKEIEQSDLQLHIGEIEDNNNVNYAPSQKEALQTAINSKVMLLT
GGPGTGKTTVIKGIVELYAEIHGLSLNYADYQDDDYPVVLAAPTGRASKRLQESTGLEAM
TIHRLIGWNQDTQPEDILDNEIKAKLIIIDEMSMVDTWLFHQFLSAVPLDAQIVFVGDED
QLPSVGPGQVFKDLIDSKAIPRVNLTEVYRQQDGSSIIDLAHRMKHGESIDISQRFHDRS
FINCGVEQIPSVVEKVVASAVNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQDILNPKEDD
TREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGIIVGIFWAKENALNKDVLVVDFEGNE
ITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVL
LGDPKAFDMGLNTQGQARHTQLCELILAYFKIDATHEQVIKDEDDIFNVNKDNIDTRDHS
IEKEDQNHIVLSEATIYQINPMINMGETSPYDFVER
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccctacattatttgattattcaatgataaaaggtacagttgatgctatctta
tttcaaaataatgataatttttatactgtgctcaaagtcgatacgatagaaaccaatgag
tcttttggtaatttgccaacagtcgtaggtttctttcctaatattgtagagggtgacgta
tatacttttaagggtcaagttgtagaacatcctagatatggtaaacaattaaaggctgac
acattcgagaaagagattcctcaaacaaaagatgcgattgtaagttacttatctagtgat
ttatttaagggtatcgggaaaaagactgctcaaaatatagtaaatacactcggtgaaaat
gctattaatgatattttaaatgacgctacagtacttgaaaatgttccaagtcttccaaaa
aagaagcaaaagcaaattgctgaacaaatacaggctaatcaagagtcagaaaaaattatg
atccgcttacacgatttaggctttggtcctaaattatcaatggcaatataccagttttat
caatctgaaacacttcaagtccttgagaaaaatccataccaacttgtatatgatgtaaag
ggtattggttttcaaaaggcagatacactagctagaaataatggtattgcgttcaatgat
caagaaagattgaaagctggattactatttactttggaagaagaatgtattaaacagggt
catacttatttagcatatgactatgttattgaagttactcaagaaatgctaagtgacaaa
cgtcaaggggaaacaatagagcatcgacaattagaagaagttttacaaaatttatctgaa
gaaagcaaattaatttttgataaccaacgtgtcgccattcctagtttatattattctgag
ttgaaaagtgttcagaatttgtaccgtattaaaacatacaaaaataaactgaaagaaata
gaacagtctgatttacagttacatattggcgaaattgaggataacaataatgtgaattac
gcaccttcacaaaaagaagcattacaaactgctataaattctaaagtaatgcttttaacc
ggtggaccaggcacagggaaaacaacagtaataaaagggattgtagagctatacgctgaa
attcatggattatctttaaattatgcagattaccaagatgatgattatcccgttgtttta
gcagcgccgactggccgtgcgtccaaacgactgcaagaatcaaccggactagaggcgatg
actattcatcgtttaatagggtggaatcaagatacacagcccgaagatatattggacaat
gaaataaaagctaaattaattattattgatgaaatgtctatggtagatacttggttattt
caccaattcttaagtgcagttcctttagatgcacaaattgtgtttgttggagacgaagac
caattaccttcagttggtccaggtcaagtttttaaagatttaatagattctaaagctatt
ccacgtgttaatttaaccgaagtatatcgtcaacaagatggttccagtattatagacttg
gcacatcgtatgaagcacggagaatctattgacatatcacaacgttttcatgatagaagc
tttatcaattgcggtgtagaacaaattccttcagttgttgagaaagtagtcgcaagtgca
gtcaacaaaggttatgatatgagcgatattcaagtgttagcaccaatgtataaaggtagt
gctggcataaagagattaaatcaagtattacaagatattttaaatcctaaggaagatgat
acacgagaaatagagttcggtgatatcaaatttcgtaaaggagacaaggtattacaatta
gtcaatcggcctaacgataatatatttaatggcgatataggcattattgttggaatcttt
tgggcgaaagaaaatgctctaaataaagatgtactggtagttgattttgagggaaatgaa
atcacctttacaagacaggatttacttgaattaacacatgcctattgtacatcgattcat
aaatcacagggttctgaatttccgatagtcataatgccaattgtaaagcaatattttaga
atgttacaaaaacctattttatatacaggacttactcgtgcaaaacaatctcttgttcta
ctaggcgatcctaaagcatttgatatgggtttaaatacacaaggacaagcacgtcacaca
caactttgtgaattaattctagcgtattttaaaattgacgctactcatgagcaagtgata
aaagatgaagatgacatattcaacgtaaataaagataatattgatacgagagaccattcc
attgaaaaagaagatcaaaatcatatcgtcttaagtgaagctacgatttaccaaattaat
cctatgataaatatgggcgaaacttctccttatgattttgttgagcgttga
DBGET
integrated database retrieval system
