Staphylococcus taiwanensis: HYI43_06655
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Entry
HYI43_06655 CDS
T08434
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stas
Staphylococcus taiwanensis
Pathway
stas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYI43_06655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stas03019
]
HYI43_06655
03400 DNA repair and recombination proteins [BR:
stas03400
]
HYI43_06655
Enzymes [BR:
stas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYI43_06655
Messenger RNA biogenesis [BR:
stas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYI43_06655
DNA repair and recombination proteins [BR:
stas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYI43_06655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
YlmH_1st
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
UDI78235
LinkDB
All DBs
Position
1394884..1396263
Genome browser
AA seq
459 aa
AA seq
DB search
MLEEKLNKWFGYTSFNPGQKEIIESVLNNTHTLGILPTGSGKSLCYQLPTYIKQQPTLII
SPLISLMDDQVMQLKSQGEKFVSCIHSGMDENEKQKNIKLLSSSRFIFLSPEFILQPQNF
KLIRYINFGLVVLDEAHCLSEWGYDFRPHYALIGEVTKHFKRATILALTATAPPHLESDL
SFILSVKLESIKTTMNRENISFSHINFSDDDAKIKWLLHFLDYSGPTIIYVSSKKICLEL
AKIIYQHGYLTGIYHGDLSYQERHTVQHQFINNFIPVIVATSAFGMGVNKKDIRTVIHFH
LPTSPSNYLQEIGRAGRDGKPSQAISLYQPDDSFILETLLFNDAIITEDIDAYELGAFLP
PQKQDILDILNKKYSVQQLKNIFKTSMIRKKLGYQRILGYTHLDQCRRSYLLEFFGEIPE
KQAQCCDIDSDLKPLKIVNRKKVKRKLTYNEKLNNLFKA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgaagaaaaattaaataaatggtttggttacacttcatttaatcctggacaaaaa
gagattattgagagtgttttaaataatactcatactttaggaattttgcctactggaagt
ggtaaaagtctgtgttatcaacttccaacatatattaaacagcaacctactttaattatt
tcaccgttaatttctttgatggatgatcaagttatgcagttaaaatctcaaggtgaaaag
ttcgtttcatgtattcattcaggcatggatgaaaatgaaaagcaaaaaaatattaagtta
ttatctagtagtcgctttatatttttaagtccagaatttattttgcaaccacaaaatttc
aaactgattcgatatattaattttggtttagttgttttagatgaagcacattgcttatct
gaatggggatacgattttagaccccattatgcattaattggagaagtcacaaaacatttt
aagcgtgcaacaattttagctttaactgctacggcacctccacatcttgaaagcgatttg
tcattcatactctcagtaaaattggaatcaattaaaacaactatgaaccgtgaaaacatt
tctttttcacatattaatttttctgatgatgacgctaaaataaaatggttacttcatttt
ttagattattctggtcctacgattatttatgtttcatctaaaaaaatatgtttagaatta
gctaaaatcatttatcaacatggttatctaacaggtatataccatggtgatttatcttat
caagagcgacatacagttcaacaccaatttatcaataacttcataccggtaattgttgca
actagcgcttttggaatgggagtgaataaaaaagatattcgaaccgtaattcattttcat
ttaccaactagcccctcaaattaccttcaagaaataggacgtgcaggaagggatggaaag
cctagtcaagcaattagtttatatcaacctgatgatagttttattctcgaaacactttta
tttaatgatgcaatcattacagaggatatagatgcttatgaattaggtgcgtttttaccg
ccacaaaagcaagatatcttagatatcctaaataagaaatactcagtacaacaacttaaa
aacatatttaaaacttctatgattcgaaagaaattaggttatcaacgaattctaggttac
acacatttagatcaatgtcgaagaagttatttgttggaatttttcggtgaaattcctgaa
aagcaagcacagtgttgcgacattgactctgatttaaaacctttaaaaatagtaaacaga
aaaaaagtaaaacgtaaattaacttataatgaaaaattaaataatttatttaaagcatag
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