Staphylococcus taiwanensis: HYI43_07540
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Entry
HYI43_07540 CDS
T08434
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
stas
Staphylococcus taiwanensis
Pathway
stas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYI43_07540 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stas03019
]
HYI43_07540 (rny)
Messenger RNA biogenesis [BR:
stas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYI43_07540 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UDI78401
LinkDB
All DBs
Position
complement(1589022..1590581)
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AA seq
519 aa
AA seq
DB search
MNLLNLLLILLGIILGVVVGYIVARNILHQKQLQARQTADDIIKQGQKEAENIKKEKLLE
AKEENQIIKEQAEAELRERRGELQRQEARLLQKEENLDRKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLHRVEEELSQDIAVLVKEKEKE
AKEKVDKKAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEEMVDKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKVLGRLNFRTSYGQNVLKHSIEVAHLSGMLAAELGEDVGLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYAENDTVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYEGVEKAFAIQAGREIRVIVSPEEIDD
LKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaaacctcctactcattttgctggggattattctaggggttgttgtgggg
tatattgtagcccgaaatattttacatcaaaagcaattacaagctagacaaactgctgat
gatattattaagcaaggtcaaaaagaagccgaaaatatcaaaaaagagaaattattagag
gcaaaagaagaaaatcaaatcattaaagagcaagctgaagcagagcttcgcgaaagacgt
ggtgagcttcaaagacaagaagcccgacttcttcaaaaagaggaaaatttagatcgaaaa
tctgatctattagataaaaaagatgagattttagaacaaaaagaatctaaacttgaagaa
agacaacaacaagtggatgcaaaagagagtagtgttcaaacattaataatgaaacatgaa
caagaattagaacgcatctccggtctcactcaagaagaagctgtaaatgaacaacttcat
agagttgaagaagaactgtcacaagatattgcagtacttgttaaagaaaaagaaaaagaa
gcaaaagaaaaagttgataaaaaagctaaagagttattagctactaccgttcaaagatta
gcagctgatcacacaactgaatcaactgtatcagttgttaatttaccaaatgacgagatg
aaaggtcgaattataggtagagaaggtagaaatattcgtactttagaaacattaacaggt
atcgatttaatcatagatgatacaccggaagcggtaatattatctggatttgatccaatc
agacgtgaaatcgcacgtactgcattagttaatttggtttcagatggtcgtatccatcca
gggcgaatagaagaaatggtggataaagctagaaaagaagtagatgacatcattagagat
gcaggtgaacaagctacatttgaaataaatgttcacaatatgcatcctgatttagtaaaa
gtactaggtcgtctcaactttagaactagttacggtcaaaatgtcttgaaacattctatt
gaagttgcacatttatcaggaatgttagcagctgaattaggagaagatgtaggcttagct
aaacgtgcaggtttgcttcacgatgttggtaaagccattgaccatgaagttgaaggtagt
catgttgaaataggtgtcgaattagcgaaaaaatatgctgaaaatgatactgttatcaat
gctattcattctcatcatggtgatgttgaaccaacgtcaattatatctatattagttgct
gcagcagatgcactttctgctgctagaccaggtgctcgtaaagaaacacttgagaactat
atccgtagattagaacgtttagaaacactttcagagagctatgaaggtgttgaaaaagct
tttgctattcaagcaggtagagaaataagagtaatcgtttctcctgaagagatagatgac
ttgaagtcatatcgattagctagagacattaaaaatcaaattgaggaagaattacaatat
cctggtcacattaaagtgacagttgttagagagacaagagcagtagagtatgcgaaataa
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