Staphylococcus taiwanensis: HYI43_07650
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Entry
HYI43_07650 CDS
T08434
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
stas
Staphylococcus taiwanensis
Pathway
stas03030
DNA replication
stas03430
Mismatch repair
stas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYI43_07650
03430 Mismatch repair
HYI43_07650
03440 Homologous recombination
HYI43_07650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stas03032
]
HYI43_07650
03400 DNA repair and recombination proteins [BR:
stas03400
]
HYI43_07650
Enzymes [BR:
stas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYI43_07650
DNA replication proteins [BR:
stas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYI43_07650
DNA repair and recombination proteins [BR:
stas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYI43_07650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
YhfH
Motif
Other DBs
NCBI-ProteinID:
UDI79289
LinkDB
All DBs
Position
complement(1613933..1618243)
Genome browser
AA seq
1436 aa
AA seq
DB search
MTNQEKFKVLADQIKISNQLDSEIIEKGELTRVDVSNKNRTWEFQITLPYFLSHEDYLLF
TNAITEEFKEIAKVEWHFTIQNTSNQDEHAIKYFGHCIEHTALSPKVKGQLKQKRLIMSG
NVLKVMTSNDIERNHFDKVCNGSLVKAFQKCGFDIDKVVFETDDTNSYDDLASLEAHIQE
EDEKSAREATEKMEKIKAEKAKQQDNNESNVDKCQIGKPIQVENIKPIESIVEEEFKVAI
EGVIFDINLKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLDHFKALSVGKWVRAQGR
IEEDTFVRDLVMMMSDIEEIKKTPKQDKAEDKRVEFHLHTSMSQMDGIPNISAYVAQAAD
WGHKAIAVTDHNVVQAFPDAHNAAEKNGIKMIYGMEGMLVDDGVPIAYKPTDRDLKEATY
VVFDVETTGLSNQYDQIIELAAVKVKDGEIIDKFERFSNPHEKLSETIINLTHITDDMLT
DAPEIDEVLTEFKSWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRTIN
TEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVTNHKDINQKLSN
EDAYKRARPTHVTLIVQTQEGLKNLFKIVSASLVKYYYRTPRIPRSLLNEYREGILVGTA
CDEGELFTAVMQRDQSEVEKIAKYYDFIEVQPPKLYQDLIDRELIRDTETLYEIYDRILK
AGESTGIPVIATGNAHYLFEHDAVARKILIASQSGNPLNRSTLPEAHFRTTDEMLDEFHF
LGEDKAYEIVVKNTNDLADRIDKVIPIKDQLFTPRMEGANEEIRELSYANAKKLYGEELP
QIVIDRLEKELASIIGNGFSVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEITEV
NPLPPHYICPNCKTSEFFDDGSVGSGFDLPDKQCSTCGADLIKEGQDIPFETFLGFKGDK
VPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHKRG
AEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDQSASWMTTHFDFHSI
HDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKETMQIFSSPETLGVTEEEILCKT
GTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIRTGICDLSSVI
GCRDDIMVYLMYAGLEPSMAFKTMESVRKGKGLTEEMIDAMKENNVPDWYLDSCLKIKYM
FPKAHAAAYVLMAVRIAYFKVHHPLYYYAAYFTIRASDFDLITMIKDKESIKNTVKDMYS
RYMDLGKKEKDVLTVLEIMNEMAHRGFRMQPISLEKSQAFDFIIEGDTLIPPFISVPGLG
ENVAKRIVEAREDGPFLSKEDLNKKAGLSQKIIEYLDDLGSLPNLPDKAQLSIFDM
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcaggaaaaatttaaagtactcgccgatcaaattaaaatttctaatcaatta
gatagtgaaattattgaaaaaggtgaattaacgcgagttgatgtatcgaataaaaataga
acatgggaatttcaaataacattgccatatttcctttcacatgaagattatctacttttt
acaaatgcaattactgaggaatttaaagagattgcgaaagtagaatggcatttcacaatt
caaaatacaagcaatcaagatgaacatgcgattaaatattttggtcattgtattgaacac
actgctttgtcaccgaaagttaaaggtcaacttaaacaaaaacgtttaattatgtcaggt
aatgttttgaaagtgatgacatcaaatgatattgagagaaatcactttgataaagtttgt
aatggtagtttggtaaaagcttttcaaaaatgtggattcgatatagataaagtcgtcttt
gaaactgacgatacgaattcttatgatgatttagcttcacttgaagcacatattcaagaa
gaagatgagaaaagtgctagagaagctactgaaaaaatggaaaaaatcaaagctgaaaaa
gcgaaacaacaagataacaatgaaagtaatgttgacaaatgccaaattggtaaacctatt
caagttgaaaatattaagccaattgaatccattgtagaagaagaatttaaagtagcgatt
gagggcgttatctttgatattaaccttaaagaattgaaaagtggacgccatattgttgaa
ttaaaagtaacggactatactgattcattagtgttaaaaatgtttacaagaaaaaataaa
gatgatttagatcatttcaaagcattaagtgtaggtaaatgggtccgtgcacaaggtcga
attgaagaagacactttcgtccgtgatctagtaatgatgatgtcagatatcgaagaaatt
aagaaaacacctaaacaagataaagcagaagataaacgcgttgaattccatttgcataca
tcaatgagccaaatggatgggatacctaatattagtgcatatgtagcgcaagcagcggat
tggggtcataaagcaatcgctgtaactgatcacaatgtcgtacaagcgtttccagatgcg
cataacgctgctgaaaagaatggcatcaaaatgatttatggcatggaaggtatgttagtt
gatgatggtgtaccaattgcctataaaccaactgatcgtgatttaaaagaagccacttat
gtcgtatttgacgtcgaaacaactggattatccaatcagtacgatcagattattgaatta
gctgctgtaaaagttaaagacggagagattatagataaatttgaacgtttcagtaaccca
catgaaaaattatcggaaacaattattaatctaacgcatattactgacgatatgttaacc
gatgcccctgaaattgatgaagtcttaaccgaatttaaatcgtgggttggcgatgctatc
tttgtagcacataatgcgtcattcgatatgggctttattgacacaggttatgaaagactt
gggttcggaccttcaacaaatggcgttatcgatacgcttgaattgtctcgtaccattaac
accgagtatggtaaacacggtttaaatttcttagctaaaaaatatggcgtcgaactcaca
caacaccatagagccatttatgatacagaagctactgcttatattttcatcaaaatggtg
caacaaatgaaagaactcggtgtgactaatcataaagatattaatcaaaaactttctaat
gaagatgcatataaacgtgctcgtccaacgcacgtgacattaattgttcaaacgcaagaa
gggcttaaaaatctatttaaaattgttagtgcatcattagttaaatattattatcgtact
ccgagaattccacggtcattacttaatgaatatcgtgaaggcattctagttggtacggct
tgtgatgagggtgaattatttactgcagtaatgcaacgtgatcaatcagaagttgaaaaa
atcgcgaagtattatgactttattgaagttcaaccaccaaaactttatcaagatttgata
gatcgagagttaatacgtgatacggaaacattatatgaaatttacgatcgtatccttaaa
gccggtgaaagtactggtattcctgttatagcaactggaaatgcacattatttatttgaa
catgatgccgtagctagaaagattcttatcgcttcacaatcaggtaatccactcaatcgt
tctactttacctgaagcacattttagaactacagatgaaatgttggatgagtttcatttt
ctaggtgaagacaaagcttatgaaattgttgtcaagaatacgaatgatttagctgatcga
atagataaagttatacctattaaagaccaattatttacaccccgtatggagggtgcaaac
gaagaaattagagaattaagttatgcaaacgcaaagaaactttatggtgaggaattacct
cagattgtaatcgaccgacttgaaaaagaattggcaagtattattggtaatggtttctca
gtaatttatttaatctctcagcgtctcgtgaaaaaatcattagatgatggctacttagta
ggttcccgtggttcggtcggttcaagctttgtagcgaccatgactgaaattactgaagtt
aacccgcttccaccgcactatatttgtcctaattgtaaaacaagtgagttctttgatgat
ggttccgtaggttcaggatttgacttgcctgataaacaatgtagtacctgtggcgctgac
ctcattaaagaaggtcaagatattcctttcgaaacattcctaggatttaagggggataaa
gtacctgatatcgacttaaactttagtggtgaatatcaaccgaatgcacataactatacg
aaagtactttttggagaagacaaagtatttagagcaggtacaataggtactgttgctgaa
aagacggccttcggatatgtcaaagggtacttgaatgaccaaggtattcataaacgtggg
gctgaaattgatcgattagttaaaggttgtacaggtgtgaaacgtacaacaggacaacat
cctggtggtattatcgttgttccagattatatggatatttatgatttcacgccaattcaa
tacccagcggatgaccaaagcgcatcttggatgacgacacattttgatttccactcaatt
catgacaatgttttgaaattagatatattagggcatgatgatcctactatgattcgtatg
ttacaagatttgtctggtattgatcctaaaacaattcctgtcgatgataaggaaacaatg
caaattttcagtagtcctgaaacattaggcgttactgaagaagagatactttgtaagact
ggtacgtttggtgtgcctgagttcggtactggattcgtacgtcaaatgctagaagatacg
aaaccaaccacattctctgaacttgtacaaatatctggactctctcacggtacagatgta
tggttgggcaatgctcaagaattaattcgcactggtatttgtgatttatcaagtgtaatt
ggttgtcgtgacgatatcatggtgtacttaatgtacgctggattagaaccttcaatggcc
tttaaaacaatggagtctgtacgtaaaggtaaaggtctaacagaagaaatgatagatgct
atgaaagaaaataacgtaccagattggtacttagattcatgtttgaaaatcaaatacatg
ttccctaaagcccacgcagcagcatatgtattaatggcagtgcgtatcgcttattttaaa
gtacatcatccgttatattattatgcggcttactttacaatacgtgcttcagactttgat
ttgatcacgatgatcaaggataaagaaagcattaagaatacggttaaagatatgtattca
agatacatggacctcggtaaaaaagaaaaagatgttcttactgtattagaaattatgaat
gaaatggcacacagaggttttcgtatgcaaccgataagtttagaaaagagtcaggcattt
gatttcataatagaaggagatacgcttatccctccgtttatatctgtgcctggactcgga
gaaaacgttgctaaacgtattgttgaagcacgtgaagatggaccattcttatctaaagaa
gatttaaataaaaaagcaggtttatcacaaaaaattatcgaatatcttgacgatttagga
tcgttacctaatttacctgataaagcacagttatcaatattcgatatgtaa
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integrated database retrieval system
