Staphylococcus taiwanensis: HYI43_07720
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Entry
HYI43_07720 CDS
T08434
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stas
Staphylococcus taiwanensis
Brite
KEGG Orthology (KO) [BR:
stas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stas03032
]
HYI43_07720 (topA)
03400 DNA repair and recombination proteins [BR:
stas03400
]
HYI43_07720 (topA)
Enzymes [BR:
stas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYI43_07720 (topA)
DNA replication proteins [BR:
stas03032
]
Prokaryotic type
DNA Topoisomerases
HYI43_07720 (topA)
DNA repair and recombination proteins [BR:
stas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYI43_07720 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
Auto_anti-p27
Cys_rich_CPXG
Porphyrn_cat_1
Motif
Other DBs
NCBI-ProteinID:
UDI78435
LinkDB
All DBs
Position
complement(1632329..1634398)
Genome browser
AA seq
689 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVEDNYEPKYITIRGK
GPVVKDLKKYAKKAKNVFLASDPDREGEAIAWHLSKILELDDSKENRVVFNEITKDAVKE
SFKHPRGIEMDLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWSIEGEFRYKKSKFTAKFLHYKNKPFKLKNKKDVEKITAELNGDEFEITN
VNKKEKTRNPANPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKRQGTVGLITYMR
TDSTRISQTAKDEAKSYIEEKYGKDYISNRTAKGKQGDQDAHEAIRPTSTLRTPDEMKAY
LTRDQHRLYKLIWERFVASQMAPAILDTVALDVTQNDIKFRANGQTIKFKGFMTLYVEAK
DDKENDKENKLPNLSEGDKVTATQIEPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKLESKRFVPTELGEIVYEQVKDYFPEIIDVEFTVNMETLLDKIAEGDIG
WRKVIDNFYGSFKLDVERAEDEMEKVEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNF
PDCRNTKAIVKTIGVKCPKCKDGDVVERKSKKNRLFYGCSNYPDCDFISWDKPVGRDCPK
CNHYLMEHKKGRSSQVICSNCDYKEEVQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggcagataatttagtcatagttgagtcgcctgcaaaagctaaaaccattgaaaagtat
ttaggtaaaaaatataaagtaatagcttctatgggacatgtgagagacttaccaagaagt
caaatgggtgtcgatgtagaagataactatgaaccaaaatatattacaattcgcggtaaa
ggtcctgttgttaaagacttaaagaaatatgctaagaaagcgaaaaacgtttttcttgca
agtgaccccgaccgtgaaggtgaagcgattgcttggcatttatcaaaaattttagaactt
gacgattcaaaagaaaatagagttgtatttaatgaaattacaaaagatgcagtaaaagaa
agtttcaaacatcctcgtggtatagaaatggatttagtagacgcgcaacaggcacgtcgt
attttagatagactagttggttataatatttctccagtattatggaagaaagtaaaaaaa
ggattatcagcaggtagagttcaatcagtcgcattaagattagtgattgatcgtgaaaat
gaaattcgtaattttaaacctgaagaatattggtcaattgaaggagaatttagatataaa
aaatctaagtttactgctaagtttctacattataaaaataaaccttttaaattgaaaaat
aagaaagacgttgagaagatcacagctgaattaaatggtgacgaatttgaaatcactaat
gtaaacaaaaaagaaaaaactagaaacccagctaacccttttacaacgtctacactacaa
caagaagctgcacgtaaattaaactttaaagcacgtaaaacgatgatgttagcacaacaa
ttatatgaaggtattgaccttaaaagacaaggtacagttggtttaattacttatatgcgt
accgattctactcgtatttctcaaacagctaaggatgaagctaagtcttacattgaggag
aaatatggtaaagattatatttcgaatagaacagctaaaggtaagcaaggagatcaagat
gcccatgaagctattcgtccaacgagtacgttacgtacaccggacgaaatgaaagcatat
ttaactagagaccaacatcgtttatataaattgatttgggaaagatttgtagctagccaa
atggccccagcaattttagacacggtagctttagatgttacacaaaatgacattaagttt
agagctaatggtcaaacaattaaatttaaaggtttcatgactttatatgttgaagcgaaa
gatgataaagagaatgataaagaaaataaattgccgaatttaagcgagggcgataaagta
actgctactcagattgaaccagcacaacactttactcaaccgcctccacgttatacagaa
gcacgtttagttaaaactttagaggaactaaaaatcggtagaccttcaacatacgcacct
acgattgatactattcaaaaacgtaattacgttaaacttgaaagtaaacgatttgtacct
actgaactaggcgaaattgtatatgagcaggttaaagactatttccctgaaattattgat
gtagagtttacagtaaacatggaaactttacttgataaaattgccgaaggagatattggc
tggcgaaaagtaattgataatttctatggaagtttcaaattagatgttgaacgtgctgaa
gatgaaatggaaaaagtagaaattaaagatgaaccagctggggaagattgtgaagtatgt
ggatcaccaatggttatcaaaatgggacgttatggtaaatttatggcttgttcaaacttc
ccggattgtagaaatactaaagcaattgtaaaaaccattggtgttaaatgtcctaaatgt
aaagatggcgacgtagttgaaagaaaatctaagaaaaatagattgttttacggttgttca
aattatccagattgtgactttatctcatgggataaacctgtaggtcgcgactgtcctaaa
tgtaatcactacttaatggaacataaaaaaggacgtagttcacaagtaatatgttcaaac
tgtgattataaagaagaagttcaaaaatag
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