Staphylococcus taiwanensis: HYI43_10075
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Entry
HYI43_10075 CDS
T08434
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
stas
Staphylococcus taiwanensis
Pathway
stas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYI43_10075 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stas03019
]
HYI43_10075 (recQ)
03400 DNA repair and recombination proteins [BR:
stas03400
]
HYI43_10075 (recQ)
Enzymes [BR:
stas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYI43_10075 (recQ)
Messenger RNA biogenesis [BR:
stas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYI43_10075 (recQ)
DNA repair and recombination proteins [BR:
stas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYI43_10075 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
GH123_cat
zf-CXXC
QueC
Motif
Other DBs
NCBI-ProteinID:
UDI78883
LinkDB
All DBs
Position
complement(2101777..2103555)
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AA seq
592 aa
AA seq
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MEATLSHYFGYDKFRPGQKEIITKIMDHHNVLGVLPTGGGKSICYQVPGLMLGGTTIVIS
PLISLMKDQVDQLKAMGIKAAYLNSSLTKKQQKTIENDLMTGDIQFLYVAPERFDNHYFL
SLLSRIDIHLIAFDEAHCISKWGHDFRPSYQSVIKKVFTLPQNFTIVALTATATTEVQQD
IMDKLNIDRHDEVKTSTKRRNLIFKVNPTYQRQKFVVDYIQKHKDQAGIVYCSTRKQVEE
LQEALETIRVTTAIYHAGLSNKEREEAQNDFVYDRVKVVIATNAFGMGIDKSNVRYVIHY
NMPGDLESYYQEAGRAGRDGLESECILLFSERDKGLHEYFITVSQADDDYKDKMGEKLTK
MLQYTKTKKCLEATIVHYFEPNEKLEECGQCSSCIQQNKTYDMTQEAKMIISCIARMRQQ
ENYSVVIQVLRGETSDYIKYNHYDQLPTHGLMKGYTTSELSHLIDELRFKGFLNEYDEIL
ICDESVKKLLNNNKKVFTTPFKQKTKEKVHINTVEGVDRVLFSELVEVRRKLSEKLEIAP
VSIFSDYTLEEFAKRKPESKQEMISIDGVGSYKLKHYCPKFLERIQSYKTSI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaacattgtcgcattattttggttatgacaaattcagacctggacagaaagaa
attataactaagataatggatcatcataatgtattaggtgtattaccaacaggtggcggt
aaatcaatttgttatcaagtgcctggtttgatgctaggtggtacaacgattgtcattagt
cctttaatttctttgatgaaagaccaagtagatcaattgaaagcgatggggattaaagca
gcatatttgaatagcagtttgactaagaaacaacaaaagacgattgagaatgatttaatg
actggtgatattcaatttttatacgtagcgccagaacgttttgataatcactacttctta
agtttactaagtcgaatcgatatccatcttattgcgtttgacgaggcacattgtatttct
aagtgggggcatgattttagaccgagttatcaaagtgttatcaaaaaggtatttacttta
cctcaaaactttactattgttgcactcacagctacagctactacggaagtacaacaagac
attatggacaagcttaacattgatagacatgatgaagtgaaaacaagtaccaaacgtcgt
aatcttatcttcaaagtgaacccgacgtatcaacgtcagaaatttgtcgttgattatata
caaaaacataaagaccaagcaggtattgtatattgttcaacacgtaaacaagttgaagaa
ttacaggaagcgctagagactattcgcgttacgacagcaatttatcatgctgggctatcg
aataaggaacgtgaggaagctcaaaatgatttcgtttatgatcgcgtaaaggttgttatc
gccacgaacgcatttggtatgggtattgataaatcaaatgtgcgttatgtcattcattat
aatatgccaggtgatttggaatcttattatcaagaagcaggacgtgcaggacgtgatggg
cttgaaagtgagtgtatcttgctttttagtgaacgtgataaaggattacatgaatatttt
attacagtatcgcaagcagatgatgattataaagataaaatgggcgaaaagctaactaag
atgctgcaatacaccaagacgaaaaagtgtcttgaagcgacgattgttcattattttgaa
cctaatgagaaattagaagagtgtggccaatgtagtagttgcattcaacaaaataaaaca
tatgatatgacgcaagaagccaaaatgattattagttgtattgcacgtatgcgtcaacaa
gaaaattatagtgtagttattcaagtattacgtggagaaactagtgactatattaaatat
aatcattatgaccaattaccaacacatggactgatgaaagggtacacaacatcagagtta
agtcacttgatagatgaactacgttttaaaggctttttaaatgaatatgatgaaattttg
atctgcgatgagagcgtcaaaaagttattgaataataacaagaaagtattcactacacca
ttcaaacaaaaaacgaaagagaaagtacatattaatactgttgaaggtgtcgatagagta
ttatttagtgaactagttgaagtacgtcgtaaattaagtgaaaaactagaaattgcaccg
gttagtattttttcagattatacacttgaagaattcgcaaaacgcaagccagaatctaag
caagaaatgatttcaattgatggtgtcggtagttacaagttaaaacattattgtccgaag
ttcttagaacgcattcaatcatataaaacaagtatataa
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