Spongiibacter taiwanensis: NCG89_00420
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Entry
NCG89_00420 CDS
T08367
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00020
Citrate cycle (TCA cycle)
staw00190
Oxidative phosphorylation
staw00650
Butanoate metabolism
staw00720
Other carbon fixation pathways
staw01100
Metabolic pathways
staw01110
Biosynthesis of secondary metabolites
staw01120
Microbial metabolism in diverse environments
staw01200
Carbon metabolism
Module
staw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
staw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
staw_M00149
Succinate dehydrogenase, prokaryotes
staw_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NCG89_00420 (sdhA)
00650 Butanoate metabolism
NCG89_00420 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NCG89_00420 (sdhA)
00720 Other carbon fixation pathways
NCG89_00420 (sdhA)
Enzymes [BR:
staw01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NCG89_00420 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
DAO
GIDA
Thi4
FAD_binding_3
NAD_binding_8
NAD_binding_7
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
USA43269
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All DBs
Position
89955..91727
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AA seq
590 aa
AA seq
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MSTIRTISFDGVIVGGGGAGMRAALQLAQSGYKTAVISKVFPTRSHTVSAQGGITCAIAS
NDPNDQWQWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELDHMGLPFSRTEEGRIYQRP
FGGQSKNFGEGGQAARTCAAADRTGHALLHTLYQGNLKNNTVFFNEWYATDLVKNQDGAV
VGVIAICIETGEVVHVKSKATVFATGGAGRIYQSTTNAHINTGDGIGMALRAGFPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLVNKDGERFMERYAPNAKDLAGRDVVARSMTLEI
IEGRGCGPNGDHVYLKLDHLGEEVLESRLPGICELSRTFAHADPVKEPIPVIPTCHYMMG
GIPTNIHGQALTVDANGNDVVIPGLYACGEVACVSVHGANRLGGNSLLDLVVFGRASGLF
IEKALREGIDMRDASESDVEQAMSRLNKVNNTSGGEKVSALRAELQSVMQNHFGVFRKGD
FMQEGVKKLADLRGRIENAHLEDKSNAYNTARIEALELHNLFEVAEATAIAAEERKESRG
AHAREDFQDRDDENWLCHSMYFPGEKRVGKRAVNFAPKTREAFAPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctactattcgtactatttcgtttgatggcgtaattgttggcggtggcggcgcgggt
atgcgcgcggcactgcagttggcccagtctggttacaagaccgccgttatttccaaagtc
ttcccaacgcgctcgcacacggtgtcggctcagggtggtattacttgcgcgattgccagt
aacgacccgaacgaccagtggcagtggcatatgtatgacacggttaagggttccgactat
atcggcgaccaggacgccatcgagtatatgtgcagcgtgggtcccgaggcggtgtttgag
ctggaccacatgggtctgccgttctcccgtactgaagaaggccgaatttatcagcgtcct
ttcggtgggcaatccaaaaatttcggtgagggcggtcaggctgcccgcacttgcgcggcg
gctgaccgtactggtcacgcactgctgcacacgctgtatcagggcaacctgaagaataac
accgtcttcttcaatgagtggtatgccactgatctggtgaagaaccaggacggcgcggtt
gtgggtgttatcgcaatctgcatcgaaaccggggaagtggtccacgtcaaatccaaggcc
actgttttcgccaccggcggcgcaggtcgtatctatcaatctactaccaacgcccacatc
aatactggcgacggtatcggcatggccctgcgtgcaggcttcccggtgcaggacattgaa
atgtggcaatttcaccccaccggtattgccggcgcgggtgttctggtcaccgaaggctgc
cgcggtgaaggcggttacctggtaaacaaggacggcgaacgctttatggagcgttatgcg
cccaacgcaaaagacctggcgggccgcgatgtggttgcccgctccatgaccctggagatt
attgaaggccgcggttgtggtcccaatggtgatcacgtttacctgaaactggatcacctg
ggcgaagaggttctggagagccgtctgcccggtatctgtgagctgtcccggacctttgcc
cacgctgacccggtcaaagagcccattccggttatcccgacctgtcactatatgatgggt
ggtattcccaccaatattcacggccaggccctgaccgttgatgccaacggcaatgacgtg
gtgatccccggactgtatgcctgtggtgaagttgcctgtgtatcggttcacggcgctaat
cgcctcggtggtaactcgctgctggatctggtggtgttcggtcgcgcatctggtctgttc
attgagaaggccctgcgtgaaggcatcgacatgcgcgacgcgtccgagagcgatgttgaa
caagccatgtcgcgtctgaacaaggtgaacaacacctcaggcggcgagaaagtttccgca
ttgcgcgccgagctgcaaagcgtcatgcagaatcacttcggtgtattccgcaagggcgac
ttcatgcaggaaggcgtcaagaagctggctgatctgcgtggccgcattgaaaatgcgcat
ctggaagacaagagcaacgcgtacaacacagcgcggatcgaagccctggaactgcacaac
ctgttcgaagtggctgaagcgaccgccattgctgctgaagagcgcaaagagagccgtggt
gcccatgcgcgtgaggacttccaggaccgcgatgacgaaaactggctgtgccactccatg
tatttccccggtgaaaagcgtgtcggcaagcgtgcggtgaatttcgcaccgaagacccgc
gaagcttttgcgcccaaagtacgcacctactga
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