Spongiibacter taiwanensis: NCG89_02195
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Entry
NCG89_02195 CDS
T08367
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
staw
Spongiibacter taiwanensis
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
staw03016
]
NCG89_02195
Enzymes [BR:
staw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NCG89_02195
Transfer RNA biogenesis [BR:
staw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCG89_02195
Prokaryotic type
NCG89_02195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
USA43607
LinkDB
All DBs
Position
complement(436739..437749)
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AA seq
336 aa
AA seq
DB search
MLPDWPRAWGGPAAQAVLRQANTDFQVEELFEFLPSGDGEFDWLLVEKSGDSTEFVARAL
AKQLGLPARAVGYSGLKDRHALTRQWYCLHRPGKAALNWSTLLGDNWRVVKGVRHRQKLR
RGSHRGNRFVLILNEVVGDRPLLNERLSALTAGFPNYFGEQRFGIDGGNIAACRQWFEQG
GQPARFEKGLYLSSARSWLFNQVLAQRVFSGTWDKALDGEVLALRDSGSVFSEPLSDEIV
ARVASGDLHPTGPLFGAPAKISVAGEVAALEQQQCNAEPVLCAGLAKHGLKMERRALRVL
PKELSWEWLDAKCLRLEFALPRGCFATALVRELVTY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctgattggccccgggcctggggaggccctgcagctcaggccgttttgcgtcag
gccaacaccgattttcaggtggaagagctgtttgaatttcttcccagtggcgatggcgaa
tttgattggctgctggtagagaagtctggcgacagtacagaatttgttgccagagcgctg
gcaaaacagcttggcttaccggctcgcgcagtgggttactccgggctgaaagatcgtcat
gcactgactcgccaatggtattgcctgcaccgtcccggcaaagcggcgctcaactggagt
accctgctgggcgacaattggcgggtggtgaagggtgtgcgccaccggcaaaaattgcgc
cggggcagtcatcgcggaaaccgctttgtactgattcttaatgaggtggtgggtgatcgt
ccgttactcaacgagcgtttgtcagcattgaccgccggatttcccaactattttggcgaa
cagcgttttggcattgatggcggcaacattgcggcctgtcgtcagtggtttgaacagggc
ggccagccggcccgcttcgaaaaaggcctctacctttcctcggctcgctcctggttattc
aatcaggttctggcgcaacgtgttttcagcgggacgtgggataaagctctggatggcgag
gttcttgctttgcgcgatagcggcagtgttttttctgagccgttgagcgatgaaattgtt
gcccgcgtggccagcggcgatctgcatcccaccggcccgctctttggtgccccggcaaaa
atcagcgttgccggtgaggtagcggcccttgaacaacagcaatgcaatgcggagccggtg
ttgtgtgcgggtttggcaaagcacggtctcaagatggagcggcgtgcgctgcgggtcttg
cctaaggagctgtcttgggagtggcttgatgctaagtgtctgcggttagaatttgcgctg
ccccggggctgtttcgcgacagcgcttgtgcgagaattggtgacatactaa
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