KEGG   Spongiibacter taiwanensis: NCG89_02495
Entry
NCG89_02495       CDS       T08367                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
staw  Spongiibacter taiwanensis
Pathway
staw03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:staw00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    NCG89_02495 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:staw03019]
    NCG89_02495 (rnc)
   03009 Ribosome biogenesis [BR:staw03009]
    NCG89_02495 (rnc)
   03036 Chromosome and associated proteins [BR:staw03036]
    NCG89_02495 (rnc)
Enzymes [BR:staw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     NCG89_02495 (rnc)
Messenger RNA biogenesis [BR:staw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NCG89_02495 (rnc)
Ribosome biogenesis [BR:staw03009]
 Eukaryotic type
  90S particles
   RNase
    NCG89_02495 (rnc)
 Prokaryotic type
  rRNA processing factors
   NCG89_02495 (rnc)
Chromosome and associated proteins [BR:staw03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     NCG89_02495 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM WH_DRP
Other DBs
NCBI-ProteinID: USA43665
LinkDB
Position
complement(503700..504374)
AA seq 224 aa
MQDFQSLCRRVGYRFQSVNLLHQALTHRSYSADNNERLEFLGDGLLNLIIAESLFQRFEE
QTEGNLSRMRAKLVNGETLAEIGRDFQLGDFLRLGTGELNAGGRERDSILADAVEALIGA
IYLDSDFDTCRQHVLSWFSSRLASINPRSSHKDAKTKLQEFLQARKMALPVYDLVDISGA
DHQQCFTVSCSVAMLNQPLLASGGSRRKAEQAAAEAVLNALQAL
NT seq 675 nt   +upstreamnt  +downstreamnt
gtgcaggattttcagtcactctgtcgcagagtggggtaccggtttcagagcgtcaatctg
ttgcatcaggcgctcactcaccgaagctacagcgcggacaacaatgaaaggcttgagttt
ctcggcgatggcttactcaacctgattattgccgagtcgttgtttcagcgctttgaggaa
caaaccgaaggtaatctcagccggatgcgggccaagctagttaacggcgagacacttgct
gagattggccgggactttcagttgggcgactttcttcgtcttggaacgggcgagctgaat
gccggtggccgggagcgcgactccattctggctgacgctgtcgaagcattgattggcgcg
atttacctggatagcgattttgacacatgccgccagcacgttctgagctggttttcgtcc
cgcttggcatccattaatccccggtcgagtcacaaagacgccaaaaccaaattgcaggag
tttttgcaggcgcggaaaatggcgttgcctgtgtacgacctggtcgatattagcggcgca
gaccaccagcagtgttttaccgtgtcctgctcggtagcgatgctcaatcagccacttttg
gccagcggtggcagtcggcgcaaagcagagcaggcggcagcggaagctgttctcaatgcg
ctgcaagcgctgtag

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