Spongiibacter taiwanensis: NCG89_02810
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Entry
NCG89_02810 CDS
T08367
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCG89_02810
09124 Replication and repair
03420 Nucleotide excision repair
NCG89_02810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
staw03021
]
NCG89_02810
03400 DNA repair and recombination proteins [BR:
staw03400
]
NCG89_02810
Enzymes [BR:
staw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NCG89_02810
Transcription machinery [BR:
staw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCG89_02810
DNA repair and recombination proteins [BR:
staw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCG89_02810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
USA43726
LinkDB
All DBs
Position
568962..571307
Genome browser
AA seq
781 aa
AA seq
DB search
MNVSVRSLCEFAARKGSLDFRYTPSPTALEGVTGHIKVQSRRPDPYVAEYPLSGEWEGLS
LGGRVDGYFASKKSPYLEEIKTHRGDVRRIGPGPRGLHWAQLKVYGALFCLRENRDSICL
KLTYFDVVKERETSEELLFEAADLLNFTGELCARYRQWAEQNQRHRQQRDTALSALKFPF
DHFRRGQRDLSETVYKTISTGRHLLLQAPTGIGKTLGVLYPALLTLPRKQIDRLFFLSCR
NTGKQLALDALGALKQCQREAVPLRIVELSAREHACEHPNLACHGESCPLADGFFDRLDG
ARQAATEAGFLDQPTLRRIALEHQICPYFLGQEMARWSDVTVGDVNHYFDQQALLFALSQ
QDEWRCLPVVDEAHNLVDRARGMYSVGLSEGLFKGARKRMAKPVARAITTLNKAWRQLTD
HYQQQIGQREGSATTERHYLPAPPDELNQALQGLIHAVIDHLSEHAGDNETQQLLFAAVA
YLRLAELFGDHSLCSLDFQRDLSGNALPGSAMLNIDNLIPADHLQARFASAHSSVLFSAT
LSPPDYYRDLLGLPADSHWQDIDSPFSADQLELRVVRHISTRLQHRQQSLAPIAERIARQ
YQRKPGNYLMYVSSFRYLNDLTAQMAKAHPDVPVFKQTPAMAPQRRQDFIDRFKSGHAGV
GFAVLGGVFSEGIDLPGEQLIGVFVATLGLPPFDHFHQILQQRMHARFGNGYEYTYLYPG
LRKVIQAAGRLIRSPSDSGVIELIDPRFAEAEVNALLPSWWHPVPAARLNADSAAAPDDT
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtcagttcgctcattgtgtgagttcgccgctcgcaaaggcagcctggatttt
cgctacaccccctcacccactgccttggaaggcgtcaccggccacatcaaggtccagtcc
cgacgacccgacccctatgtggccgagtatccgctcagcggcgagtgggaaggactcagc
ctgggcggccgggtggatggctacttcgccagcaaaaaaagcccctaccttgaggagatc
aaaacccatcggggggacgttcgccgtattggccctggcccaaggggactgcactgggcc
cagttaaaagtgtacggcgcattgttctgcctgcgagagaaccgcgacagcatctgtctt
aagctgacctattttgatgtagtcaaagagcgggaaaccagtgaggagctactgttcgag
gctgccgacttgctcaatttcaccggcgaactgtgcgcgcgctaccggcagtgggcagag
caaaatcaacgtcatcgtcaacagcgtgatactgccctcagcgcgctgaaatttcccttt
gaccactttagacggggccagcgcgacctgtcagaaacggtctacaagaccatcagcacc
ggccgccatttgctgttacaagcgcccaccggcatcggcaaaaccctcggtgtgctatac
cccgcgctgctgaccttgccccgcaaacaaatcgatcgcctgttctttctcagttgtcgc
aacaccggcaagcaactggcactcgatgcccttggcgcactcaagcaatgccagcgtgag
gcggtgcctttaagaatagtggagctgagcgcccgggagcatgcgtgtgagcaccctaat
ctggcctgccacggcgaatcctgtccactggctgacggcttttttgaccgccttgatggt
gccaggcaagccgcaactgaagccggttttctggaccagccgaccctgcggcgcattgcc
cttgaacaccagatttgcccctactttctcggccaggagatggcccgctggagcgatgtc
accgtgggcgacgtcaatcattacttcgaccagcaggcattgctgtttgccctcagccag
caggatgaatggcgctgcctgccggtggtcgacgaggcccataacctggtcgaccgggcc
cggggaatgtacagcgtcggcctgagcgaagggcttttcaaaggggccagaaaacgcatg
gccaaaccggtggccagagccattaccacgctaaacaaggcgtggcgccaactgaccgac
cactaccagcagcagatcggccagcgtgagggcagtgccaccaccgaacgccactatttg
cccgccccgcccgacgagctgaaccaggccctgcaagggctgattcacgcggtgatcgac
cacctcagcgaacacgccggcgacaatgaaacccagcagctgttatttgccgccgtagcc
tacctgcgcctcgcagaactgtttggcgaccactccctgtgcagtctcgatttccagcgt
gatcttagcggcaatgccttgcccggcagcgcaatgttgaatatcgacaatctgattccc
gccgaccatctccaggcgcgatttgccagcgcccacagcagcgtgctgttctccgccacg
ctgtcaccaccggactattaccgcgacctgctgggcctgcccgccgacagccactggcag
gatatcgacagccccttctcggccgatcaattggagctgcgggtagtgcggcatatcagc
acccgcttgcaacaccgccagcaatcgctggcgccgattgccgagcgaattgcccggcaa
taccagcgcaagcccggcaactacctgatgtatgtgagcagcttccgctacctgaatgac
ctgaccgcacaaatggcaaaagcccatccggacgtgccggtgttcaagcaaaccccggcg
atggcgccccagcggcggcaagactttatcgaccgattcaaaagcggccacgccggtgtc
ggttttgcggtattgggcggggtgttttcagagggaatcgatctgccgggcgagcagtta
atcggggtgtttgtggccactctcggcctgccgcccttcgaccactttcatcagattctg
caacagcggatgcacgcgcgctttggcaatggctacgagtacacctacctctacccgggc
ctgcgaaaggtgattcaggcggccggacgcttgatccgcagccccagcgatagcggagtc
atcgaactgattgacccaagatttgccgaggccgaagtcaacgcgctgctacccagctgg
tggcatccggtgccagccgcgcgactcaacgccgattcagcagcagcgccagacgatacg
tcatga
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