Spongiibacter taiwanensis: NCG89_04245
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Entry
NCG89_04245 CDS
T08367
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18296
multidrug efflux pump
Organism
staw
Spongiibacter taiwanensis
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
staw02000
]
NCG89_04245
01504 Antimicrobial resistance genes [BR:
staw01504
]
NCG89_04245
Transporters [BR:
staw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NCG89_04245
Antimicrobial resistance genes [BR:
staw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
NCG89_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Phage_tail_terminator_5
Motif
Other DBs
NCBI-ProteinID:
USA43997
LinkDB
All DBs
Position
complement(889673..892816)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSRFFIQRPNFALVVAIFISLAGLLAIPSLPMSQFPVVAPPQVSISATYPGASATTVMES
VTNVIEEELNGTKGLLYYESSSNSTGSSEITVTFEPGTDPDLAQVDVQNRIKKAEARLPS
EVMQQGLQVEQANSNFLLIYALNYKGDDTGKSLVRLAEYAVRNVNNEIRRLPGVGKLQFF
SAEAAMRVWIDPQKLLGYGLSISDVNAAIAAQNVQVPAGSFGSRPGDSNQELTATIAVKG
TLDTPEEFGRIVLRANADGSRVTLADVARLEIGRQSYNFETRRNSKQSVSGAIQLSSDAN
ALETAKAVRQRLQELSKTFPEDIEYSIPYDTSLFVDVAISKVIHTLVEAVVLVFLVMFLF
LQNFRYTLVPTIVVPVCLLGTFAVMYALGFSVNMMTMFGMVLAIGILVDDAIVVVENVER
IMAEEGLSPRDATVKAMGEVSGAIVGITLVLTAVFLPLAFMAGSVGVIYQQFSLSLAVSI
LFSGFLALSLTPALCTLLLKPIAKGEEHHRGGFFGWFNRHFDKLTANFTRLNSRLVKRTG
RAMLIYVGLIGLLAFAYLRVPESFVPTEDRGFFMINVQLPAGASFNRTEQLAAQIEDHLL
KNENVDQIAFIMGFSFSGTGQNAALSYVTLKDWDERDASGSAAALVADVNQTFGATTKGS
VMAVEPPAINGLGNSGGFSLRLQDRGGLGREAFTAAKNQLLMAANQSPVIAYAMMEGLND
APQLRLNIDRQKAEALGVGFGSISTAVSSAFGSATVGDFANDGRLQRVVVQADGRFRATP
EEILALTIPNVSGNQVPMSSFASLEWEAGPVQISRYNGYSAFKISGASAPGYTSGQAMAE
IEKLVAELPAGIGYEWTGLSYQERVAGNQAPFLFSLAILVVFLLLVALYESWSIPTAVML
VVPIGALGAVLAVTVLGLANDVYFKVGLITIIGLAAKNAILIVEFAKSLREQGMSTVAAA
VEAARLRFRPIIMTSLAFILGVLPLATATGAGAASQRAIGTGVVGGMLSATVLGVIFVPI
FFVWVIKHFSRAEPQVNGASENKEAQA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttttttcattcagcgaccgaattttgctctggtcgttgccatatttatttcc
ctggcgggcctgctcgcgatcccctcgctgccgatgtcccagtttccggtagtggcgccg
ccccaggtgtcgatttctgccacctatcccggcgcgtcggcgaccacggtgatggagtcg
gttaccaacgtcattgaggaagagctgaacggcaccaagggcctgctgtactacgagtcg
tccagtaactcgacgggtagcagcgaaattacagtgacctttgagccaggcactgatccg
gatttggcccaggtcgatgtgcaaaaccgcatcaagaaggcggaggcgcgtctgccctcg
gaggtgatgcagcagggcctacaggtagaacaggccaattccaacttcttgttgatctac
gccctgaattacaagggtgacgataccggcaagtcgttggtccggctggctgaatatgcg
gtgcgtaacgttaacaatgaaattcggcgcttgcccggtgtgggtaaattgcagttcttt
agcgccgaagcggcgatgcgggtgtggatagacccgcagaagttgctcggctacgggttg
tcgatctcggatgtgaatgccgccattgctgcgcagaatgttcaggtcccggcgggaagt
tttggtagccgcccaggagacagcaatcaggagttgacagcaaccattgctgttaaaggc
acgctggataccccggaggagtttggacggattgtcttgcgtgcaaatgccgatggttcc
cgcgttaccctggccgatgttgcccgtttggagattggccgccagtcctataattttgaa
acacgccgaaatagcaaacagtcagtatcaggcgcgattcagctaagttcagatgccaac
gcgctggagactgccaaggcggttaggcagcgcctgcaagaactctccaagacctttccg
gaagatatcgaatactccatcccatatgacacctcattgtttgttgatgtggcgatttcc
aaggtgattcacaccctggtcgaagcggtggtgctcgtcttcctggtgatgtttttattc
ctgcagaatttccgctacaccctggtgcccaccatcgtggtgccggtgtgtttgctgggg
acgtttgcggtgatgtacgcgttgggattctcggtcaatatgatgaccatgttcggcatg
gtgttggccatcgggattctggtggacgacgccattgtggtggtagagaacgtcgagcgg
atcatggcggaagaagggctgtcacctcgcgatgcgaccgttaaggcaatgggtgaagtc
tcgggggctattgtcggaattaccctggtactgacggcggtgtttttgccgctggccttt
atggcaggctcagtaggggtcatttaccaacagttctcgctgtcgctggcggtgtccatt
ttgttctccggcttccttgccttgtcgctgacgccggcattgtgcacgctgctgctcaag
cccattgccaagggcgaggagcatcatcgcggcggcttttttggctggtttaatcgccac
ttcgataagttgaccgctaatttcacccgtttgaactcgcggttggtgaagcggaccggc
cgggcgatgttgatctacgttggcctgattggtttgctggcctttgcttatctacgggtt
cctgagtcctttgtgcccaccgaagaccgtggcttctttatgatcaacgtgcagctgcca
gccggggccagcttcaaccgcacggaacagttggctgcgcaaatcgaagaccacttgctc
aagaatgagaatgtcgatcagatcgccttcattatggggttcagcttttccggtacaggc
cagaatgccgcactcagctacgtcaccctgaaagactgggacgagcgcgatgcctccggc
tcggcggcggcgctggtggcggatgttaatcaaacctttggtgcaaccaccaaagggtcg
gtgatggcggtggagccgccggcgatcaatggcttgggcaactctggcggcttctccctg
cgcttgcaggatcgcggcggccttggtcgggaggcctttaccgcggctaaaaaccaacta
ttaatggcggcgaatcagtcgccggtcatcgcctacgccatgatggaagggctcaatgac
gcacctcagctgcgcttgaatattgatcgacaaaaggccgaagccctgggggttggcttt
gggtcgatcagtaccgcggtgtccagcgcattcggttctgcgacggtgggtgactttgcc
aatgatggccgcttgcaaagagtggtggttcaggccgacggtcgctttcgggccacacct
gaagagattcttgcgttaactattcccaacgtcagtggtaatcaggtaccgatgagtagc
tttgcgagcctggaatgggaggcgggtcccgtgcagatttcccgctataacggctactcc
gctttcaaaatttccggtgcatcagcccccggttatacctcggggcaggcgatggccgaa
atcgaaaagctggtggcagagctgcccgccggcattggttatgaatggacggggctgtct
tatcaagaaagggttgccggcaaccaggcgccgtttctgttttcgctggcgatattggtg
gtcttcctcctgttggtcgccctgtacgagagctggagtattcccacggcggtcatgctg
gtggtccccatcggtgccctgggtgctgtattggcggtgacggtgttgggcctggcgaac
gatgtgtattttaaagtcgggctgatcaccattattggtctggccgccaagaacgccatc
ctgatcgttgaattcgcaaaaagcttgcgtgagcagggtatgtcgacggttgctgcggcg
gttgaggcggcgcggctgcgttttcggcccatcatcatgacctcgttggccttcattctc
ggggtgctgcccctggcaacggcaaccggtgccggtgcggcgagccagcgggcgatcggt
accggtgtggtgggtgggatgctcagtgccaccgtgctgggggtgatttttgtacccatc
ttctttgtctgggtgatcaagcacttttcccgggccgaacctcaagtgaacggggcgagc
gaaaacaaggaggcgcaagcatga
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