Spongiibacter taiwanensis: NCG89_04395
Help
Entry
NCG89_04395 CDS
T08367
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
staw
Spongiibacter taiwanensis
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
staw03021
]
NCG89_04395 (rapA)
Transcription machinery [BR:
staw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NCG89_04395 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
ResIII
SNF2-rel_dom
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
USA44023
LinkDB
All DBs
Position
928630..931551
Genome browser
AA seq
973 aa
AA seq
DB search
MSLAFVAGQRWISNPEPDLGLGIILEAENRRVVIAFPAVEEERTYAAAAAPLSRVQFQVG
DEISVPDQGRLVVTDHQEHNGCIVYMAEDEDGQIHPVPEQILSAVISLNGPKERMLAGQL
EHPKRFELRAATLEQGNATRAANTFGLLGPRVQLLPHQLFLAREIASRPQPRALLADEVG
LGKTIEAGLIVHQLLLMERAQRVLLLVPDSLVHQWLVEMLRRFNLQFSVLDETRCALGAE
DEEDNFFAMDELEDEPDASALAAMEGADNPFESAQLVLCSLDWLTDDIQRREQALAAGFD
VLVVDEAHHLHWQEDGDVSAEYRCVEQFAEQTPAVLLLTATPENTGIEGHFARLRLLDPA
RFPSLEHFREEQQGYEDISNLIQGLLDTPEASLADSDFIAALARYLPEAQIATLKKASSS
EQREAAVRDLLDRFGTGRLLFRNTRSSVGGFPQRQLMPHPLPAPEGYRNAAPDSVNDLLR
PEQVLGDDWLSTDPRVAWLEKWLLQMEDEKVLLICAQADTAQDLELYLRLRRGIASAVFF
EGLSLVERDRAAAYFADPEDGAQLLVCSEIGSEGRNFQFAQHLVLFDLPWHPDLLEQRIG
RLDRIGQQGDIQLHVPFYENSPQALMLRWYEQALGIFDAPCTVGDAMVKAFGHSLQALLL
QPAPAASEVDTLFNQARETVAELRDNLSRGRNRLLELNSCKPLEAAELVAQLEAEQRSDA
LANYLDIFADQFGLEHEEHSENAVILRPGDHMQIEALPHLPEEGLTGTFDRQRALSREDM
VYLSWEHPLLRSAMDVIMTSDFGSASLCTLPVKGLKSGTLLLEVFFNPSLNAPAWLQLQR
QLPGHCLRLVIDDQHRDLSQAVAHSKLNQLCKGVKKTLAPALLRQVREPLGKMIQHLEAL
AQTASGQWQQQALENYRQERDEERQRLENLSQRNPDIDAATLASFDSDTERGEQALSSLQ
LNMAALRLAVVSN
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagcttttgttgccggccaacgctggatcagtaaccccgagcctgatttaggc
ctgggcatcatccttgaggcagaaaatcgccgcgtggtcatcgcctttcccgccgttgaa
gaagaacgaacctacgccgccgctgccgccccattgtcccgggtgcagttccaggttggc
gacgaaatctcggttcccgaccagggccgcctggtggtcacggaccatcaggaacacaac
ggctgcatcgtctatatggccgaagatgaagacggccagattcacccggtgccggaacag
attctcagcgcggttatcagcctgaacggccccaaagagcgcatgctggcgggccaactt
gagcaccccaaacgcttcgagttgcgcgcggccacgctggagcagggcaacgccacccga
gccgccaacacctttggcctgctcggcccccgggttcagctcctccctcaccagcttttc
ctcgccagagaaattgccagccgcccgcaaccgcgagccctgctggcagatgaagttggc
ctgggtaaaaccattgaagccggcctgatcgtccatcagctactgctgatggagcgcgcc
cagcgggtgttgctgttggtgcccgacagcctggtgcatcagtggctggtggaaatgctg
cgccgcttcaacctgcagttttcggtcctcgatgaaacgcgctgcgcccttggtgccgag
gacgaagaagacaacttcttcgccatggatgaacttgaggatgagccggatgcatcggcg
ctggccgccatggaaggcgccgacaacccctttgaaagcgcccaattggtgctctgctca
ctggactggttaaccgacgacatccagcgccgggagcaggccttagcggcaggctttgat
gttttggtggtcgacgaagcccaccacctgcactggcaagaagacggcgacgtttccgcc
gaataccgctgtgtggagcaatttgccgagcaaaccccggctgttttactgctcacggcc
acaccggaaaacaccggcattgaggggcattttgctcgcctgcgcctgctggacccagcc
cgcttccccagcctggaacacttccgtgaagagcagcagggctatgaagatatcagcaac
ctgatccagggtttgctcgatacccccgaggccagtctggcagacagcgactttatcgcc
gccctggcccgttatctgccggaagcgcaaattgccacgcttaaaaaggccagctccagc
gagcagcgggaagcggccgtacgcgacctgctcgaccgctttggcaccggccgcctgttg
tttcgcaatacgcgcagctcagtcggcgggtttccccagcgccagttaatgccccatccg
ctaccggccccagagggctatcgcaatgccgcgccggattcagtcaatgatctgctacgc
cccgaacaggtactgggcgacgattggctgagcaccgacccgcgagtggcctggctggaa
aaatggctgctgcagatggaggacgaaaaagttctactgatctgtgcccaggccgacacc
gcccaagatctggaattgtatctacgcctgcgccggggtatcgccagcgccgtgtttttt
gagggcctgagcctggtcgagcgcgaccgggccgccgcctattttgccgacccggaagat
ggcgcccagctgctggtgtgctcggagattggcagtgagggtcgcaactttcagtttgcc
cagcatctggtgctgtttgatctgccctggcaccccgatctgctggagcagcgtattggt
cgcctcgaccgcatcggccaacagggcgatatccagctccatgtccccttctacgagaac
agcccccaggcattgatgctgcgctggtatgaacaggcgctgggtattttcgacgcgccc
tgcaccgtcggcgatgccatggtgaaagccttcggccattccctgcaggctttgttgtta
cagcccgcgcctgccgcaagcgaagtggacaccctgtttaatcaggctcgggaaaccgtt
gccgaactgcgcgacaatttaagccggggccgtaaccgcctgctcgaactcaactcctgc
aaacccctggaggctgcagagctggttgcccagctggaggccgagcagcgcagcgacgcc
ctggccaactacctcgacatttttgccgaccaattcggtcttgaacacgaagaacacagc
gagaatgcggtgattctgcgccccggcgaccacatgcagattgaggccctgccccacctg
cccgaagagggactgaccggcacctttgaccgccagcgcgccctcagccgtgaagatatg
gtttacctgagctgggagcatcccctgctgcgaagtgccatggacgtgatcatgaccagt
gacttcggcagcgcgtcactgtgtaccctgcccgtcaagggcctgaagtccggcaccctg
ttgttggaagtgttctttaatcccagcctcaacgcgccggcctggctgcagctgcaacgc
cagctgcccggtcactgcctgcgtctggtcattgacgaccagcaccgggatttaagtcag
gcggtggcccacagcaaactgaatcaactgtgcaaaggcgtaaagaaaaccctcgccccc
gccctgctccgtcaggtgcgagaacccctcggcaaaatgattcaacacctcgaagcactg
gcccaaacggcgagtggccagtggcaacagcaagcactggagaactaccggcaagagcgc
gacgaggagcggcaacggctggagaatctcagccagcgcaacccagacattgacgccgcc
accctggcaagttttgatagtgacactgaacggggtgaacaggcgctatcttccctgcaa
ctcaatatggccgccttgcgcttggccgtggtcagcaactag
DBGET
integrated database retrieval system
