Spongiibacter taiwanensis: NCG89_04545
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Entry
NCG89_04545 CDS
T08367
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00300
Lysine biosynthesis
staw01100
Metabolic pathways
staw01120
Microbial metabolism in diverse environments
staw01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCG89_04545 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
staw01002
]
NCG89_04545 (dapE)
Enzymes [BR:
staw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NCG89_04545 (dapE)
Peptidases and inhibitors [BR:
staw01002
]
Metallo peptidases
Family M20
NCG89_04545 (dapE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
USA44052
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All DBs
Position
969544..970680
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AA seq
378 aa
AA seq
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MTSLSPTLELACDLIRRPSVTPKDEDCQEVMMARLEAIGFRCQRLRFAEVDNFWAVRGEQ
GPILCFAGHTDVVPTGPEANWQQPPFEPVIENGMLLGRGAADMKGSLAAMVTACERFVAA
HPDHTGRIAFLITSDEEGPSVNGTVKVVEWLEQQNEKITWCVVGEPSSTEEVGDVIKNGR
RGSLGAVLKVRGIQGHVAYPHLAKNPIHQAAPALAELASEVWDEGNDFFPATSFQISNIN
GGTGATNVIPGEVEVVFNFRFSTELTEDDLKRRTLAILDKHDLDYRIDWNLSGLPFLTAE
GPLVEAAQAAIAQVCGRETLLSTAGGTSDGRFIAPTGAQVVELGPVNATIHKVDEQVCAA
DLDTLSNLYEVMLEKLLA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgttaagcccgactctggaacttgcctgcgaccttattcgccgcccctctgtg
acccccaaagacgaagactgccaggaagtgatgatggctcgtctggaggccattggcttc
cgctgccaacgcctgcgctttgccgaggtagacaatttctgggcggtgcggggcgagcaa
ggcccaatactgtgttttgccgggcataccgatgtcgtacctaccgggccggaggcaaat
tggcagcaaccgccttttgaaccggtcattgaaaacggcatgttgttgggccggggcgcc
gccgatatgaagggcagcctggcggcgatggtcaccgcctgtgaacgctttgtggctgca
catcccgaccatactggccgtattgcttttctgatcaccagtgacgaagaaggcccctcg
gtcaatggcacggtaaaagtcgtggaatggctcgagcaacaaaatgaaaaaattacctgg
tgcgtggtgggcgagccctcttccactgaagaagtcggcgacgttatcaagaatggccgc
cgcggctcactgggcgcggtgctaaaagtgcgcggcatccagggccatgtggcctacccc
catctggccaagaaccctattcatcaagcggcgccggcactggcggaactggccagcgaa
gtctgggacgaaggcaacgactttttcccggcaacctccttccagatctccaatatcaat
ggcggcaccggtgccaccaacgtcatccccggtgaggtcgaagtggtatttaatttccgc
ttctccaccgagctgaccgaggacgacctcaagcgccgcaccctggcgatactggataag
cacgaccttgactaccggatcgattggaatttaagcggcctgcccttcctcaccgcagaa
ggcccattggtggaagcggcccaggcggccatcgcccaggtttgtggtcgggagaccttg
ctgtccaccgctggcggcacctctgacggccgttttattgcgcccaccggtgcccaggtt
gtcgagttaggcccggtcaacgcgaccatccacaaagtcgatgagcaggtctgcgctgcc
gatctcgatacgctttcaaacctgtatgaagtgatgctggaaaagctgctggcttga
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