Spongiibacter taiwanensis: NCG89_05955
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Entry
NCG89_05955 CDS
T08367
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
staw
Spongiibacter taiwanensis
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
staw03019
]
NCG89_05955 (rng)
03009 Ribosome biogenesis [BR:
staw03009
]
NCG89_05955 (rng)
Messenger RNA biogenesis [BR:
staw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCG89_05955 (rng)
Ribosome biogenesis [BR:
staw03009
]
Prokaryotic type
rRNA processing factors
NCG89_05955 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
SPP1_Dit
Motif
Other DBs
NCBI-ProteinID:
USA44319
LinkDB
All DBs
Position
complement(1279113..1280582)
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AA seq
489 aa
AA seq
DB search
MSEEILINVTPVETRVATVENGVLQEVYIERSRSKGIVGNIYQGKVVRVLPGMQAAFVDI
GLERTAFIHASDVAALDTASGEHADIRSKVREGQLLTVQVTKDPMGTKGARLTTRLSVSS
RFLVFMPGAAHIGVSHRIDDEQERLRLRALVENLAGQGDEGAPLKDGYIIRTVAEGIGED
ELASDVAFLKRLWAAVERRMKRDPAPSIIYEDLPLFMRTMRDLVRPGLEKIRIDSRESFQ
RVSQFAQDYLPEISAGLEYYPGERPIFDLYSVEDEIQKALGRKVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLEETIFKTNLEAAAALARQLRLRNLGGIIIIDFIDMKDVEHRRQV
LRALEKAMEKDYAKTSITGVSELGLVEMTRKRTRESLEHILCETCRYCHGRGSLKSPETV
CYEVFREILREARAYESKRLLVMASQEVVDRLLDEESANVADLEEFIGASIQFQVEAMYT
QEQFDVVLL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagatattaattaacgtgactcccgtggagacccgggttgccaccgttgaa
aacggcgtgctgcaagaggtgtatatcgaacgcagtcgctccaaaggcatagttggcaat
atctaccagggcaaggtggttcgggtgttgccggggatgcaggccgcctttgttgatatc
ggcttggagcgcacggcctttattcacgcgtcggacgtcgccgccctggataccgccagt
ggcgagcatgcagatattcgcagcaaagtgcgtgaaggtcagttgctgaccgtgcaggtg
accaaagacccgatggggacaaaaggggctcgcttgacaacacggttgtcggtttcttcc
cggtttctggtctttatgccgggggctgcgcatattggcgtgtctcatcgcatcgacgat
gagcaagaacgtctgcgcttgcgcgcgctggtggaaaacctggcgggtcagggtgatgaa
ggtgcgccactgaaagatggctatattatccgcaccgtcgccgagggaattggtgaagac
gagctggcctcggatgtggcatttttaaagcgactgtgggcggcggttgagcggcggatg
aaacgggatccggcgccgagcattatctacgaagacctgccgttatttatgcgcaccatg
cgagacctggtgcgccccggtttagaaaaaatccgcatcgactcccgggaaagctttcag
cgcgtcagccaatttgcccaggactacctgccagagatcagcgcgggcctggagtactac
cccggcgagcggccgattttcgacctatacagcgttgaggatgaaattcaaaaggccctg
gggcgcaaagtcgaattgaagtctggcggctacctgatcattgaccagaccgaagcgatg
actaccatcgatatcaacactggggcctttgtcgggcatcgcaacctggaagaaaccatc
ttcaaaaccaacctggaagccgcggcggccctggcccggcaactgcgactgcgcaacctt
ggcggcatcatcattatcgatttcatcgatatgaaagatgtagagcaccgtcgtcaggtg
ttgcgggccttggaaaaggccatggagaaggactacgccaaaaccagcattaccggtgtg
tcagagctggggctggtggaaatgacccgcaagcgaacccgggaatccctggagcatatc
ctctgcgaaacctgtcgttactgccatggccggggctcgctgaaatcgcctgaaacggtg
tgttatgaagtgttcagggagattttacgggaagccagagcctacgaaagcaagcggctg
ctggtgatggcatctcaggaggtggttgaccggctgctggatgaagagtcggccaatgtc
gccgatctcgaggagttcatcggtgccagtatccagttccaggtagaggcaatgtacacc
caggagcagttcgatgtggtgctcctttaa
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