Spongiibacter taiwanensis: NCG89_06260
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Entry
NCG89_06260 CDS
T08367
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00550
Peptidoglycan biosynthesis
staw01100
Metabolic pathways
staw01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCG89_06260 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCG89_06260 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
staw01011
]
NCG89_06260 (mrdA)
Enzymes [BR:
staw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NCG89_06260 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
staw01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NCG89_06260 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
USA44374
LinkDB
All DBs
Position
complement(1342846..1344711)
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AA seq
621 aa
AA seq
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MPRRLTLKNTFRERLVYRRRILVSVLVVLVMVGILVGRYTQLQIADYQVYITQSDRNRIQ
LLPIAPKRGLIFDRNGVLLAENIPSYTLNLVRERVGDMDTTLAEIGQLVELTDDDIAEFR
NRRGRPYQAIPLKFRLTEEEIAVISVNRHRLPGVEIDAQLVRHYPFGELFAHMLGYVGRI
NEQEQAEIDPVNYSGTHYIGKIGLEKYYEDILHGTVGYQNVETNAHGRILRVLERHDPLP
GGDIHLHVDAEVQKVAAKAMEGRRGAIVAIDPRSGGVVAMVSAPSFDANLFVNGISSKDY
SALRSDPDLPLYNRALQGQYPPASTIKPIWGLAGLYYGAVTASTTYYDPGFFTLPNDSRR
YRDWKRGGHGVRVDLEQAVQESCDVYFYELAHKLGIDKLHDFGARFGLGEVTGIDNTNER
AGLLPSREWKQRTRGHNWYPGETINVGIGQGFTLATPLQLAVATTVLASKGDLRAPRLLA
SVGGESIVAPLMGKIEDVTAEHWKEVTRSMETVVHGPRGTARGLTQNLKYRIASKTGTAQ
VVGIAAGERYDSAALEARKRDHALFVAFAPAEAPELAVAVVVENGEHGGSVAGPIARQVL
DAYILGEQAQPFDGQLPASGD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcgcctgaccctcaaaaacaccttccgcgagcgccttgtgtatcggcgccgg
atactggtttcggtgttggtggtgctggtcatggtgggtattttggtcgggcggtatacc
cagctgcagatagccgactaccaggtgtatatcacccagtctgaccgcaaccgcattcag
ctgctgccgattgcgcctaagcgtgggttgatctttgaccgcaacggggtgttgctggcc
gagaacatccccagttataccctgaacctggtgcgggagcgggttggtgatatggacacc
actctggccgagattggccagttggtggaactgacagatgacgatattgcagaattccgc
aatcgccggggccggccttaccaggcgattccgctgaaatttcgtctgaccgaggaggag
attgcggtgatctcggtcaatcgccatcgcctgccgggggtggagattgatgcccagctg
gttcgccactacccctttggtgagctgtttgcgcatatgctcggctacgtcggccgaatc
aatgagcaggagcaggccgagatcgacccggtcaattacagcggcacccactacatcggc
aagatcggcctggaaaagtattacgaagatatcctccacggcacggtgggttaccagaat
gtcgaaaccaatgcccacggccggattctgcgggtgctggagcgacacgacccgctgccc
gggggcgatattcatttgcatgtggatgccgaggtgcaaaaggtggccgccaaagccatg
gaggggcggcgcggtgcgatagtggccattgatccgcgcagcggcggtgtggtggcgatg
gtcagcgcgcccagctttgacgccaatctgtttgtgaatggcatcagctccaaggattat
tccgcgctgcgctcagaccctgatctgccactgtacaatcgggcgctgcaagggcagtat
ccgccagcgtccaccatcaagccgatctggggcctggctggcctatactacggcgccgtg
acggcctctaccacctactatgacccggggtttttcaccctgcccaacgacagccgtcgc
tatcgcgactggaagcggggcggccacggcgtgcgcgtggatttggagcaggccgtacag
gaatcctgcgatgtttacttttatgagttggcccacaaactcggcatcgacaagttgcat
gatttcggcgcccgctttggcctgggtgaagtcaccggaatcgacaataccaacgagcgg
gccggtctgctgccgtccagggagtggaaacagcgtacccgcggccacaattggtatccc
ggtgagacaattaatgtgggcatcgggcagggcttcacccttgccactccgctgcagttg
gcggtggcgacgaccgtgctggcgtccaagggtgaccttcgggcgccgaggttgttggca
tcggttggtggtgaatccattgtggcgccattgatgggtaagattgaagacgtgaccgcc
gaacactggaaggaggtcacgcgctcaatggagaccgtggtccacggccccagagggacc
gctcgcgggttgacccaaaatctgaaatatcggattgccagtaaaacggggactgcgcag
gtggttggcatcgccgctggcgagcgttatgactccgctgctctggaggcccgcaagcgc
gatcacgccttgtttgtcgcctttgctccggccgaggcacctgagctggcggtggcggta
gtggtcgaaaatggtgagcatggcggtagcgtggcggggccgattgcccgccaggtgctg
gatgcctatattcttggcgagcaggcccagccctttgacgggcagttgcccgccagtggt
gattaa
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