Spongiibacter taiwanensis: NCG89_07300
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Entry
NCG89_07300 CDS
T08367
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00521
Streptomycin biosynthesis
staw00523
Polyketide sugar unit biosynthesis
staw00541
Biosynthesis of various nucleotide sugars
staw01100
Metabolic pathways
staw01110
Biosynthesis of secondary metabolites
staw01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCG89_07300 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCG89_07300 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCG89_07300 (rfbC)
Enzymes [BR:
staw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCG89_07300 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
USA44830
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All DBs
Position
complement(1589139..1589696)
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AA seq
185 aa
AA seq
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MNVIPTSLSNCVVIEPNVHSDRRGLFLESYHAQRFSQEAGIDLPFVQHNFSVSVRGVLRG
LHFQRRQPQGKLVRVTRGEIFDVAVDIRQGSPSFAQWFGVTLSSASHRQLWVPPGFAHGF
LVLSDVAEVEYKCTAYYAPEDEASIAWDDPVLQIAWPLPSGVIPILSDKDAAAPGFEWFC
NEGVL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgatccctacttcgttgagtaactgtgttgtgatcgagcccaacgtacacagc
gaccggcgcgggctgtttcttgagtcgtatcacgctcagcgtttctcccaggaggccggt
attgacctgccctttgtgcaacacaatttttctgtttcagttcgtggcgttttgcggggg
ctgcatttccagcgccgccagcctcagggaaagctggtgcgagttactcgtggcgaaata
tttgatgtggcggtcgatattcggcaggggtcgcctagctttgcgcaatggtttggcgta
acgctttcatcggcgagccatcgtcagctttgggtgccaccagggtttgcacacggattt
ttggtgctcagcgatgttgccgaggtggagtacaaatgcactgcctactacgcccctgaa
gatgaggcgagcatagcttgggatgatccagtgctgcagattgcttggcctttaccctcg
ggcgtgataccgatcctgtctgacaaagatgctgccgctcccgggtttgaatggttttgc
aacgagggggtattgtga
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