Spongiibacter taiwanensis: NCG89_07305
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Entry
NCG89_07305 CDS
T08367
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00521
Streptomycin biosynthesis
staw00523
Polyketide sugar unit biosynthesis
staw00541
Biosynthesis of various nucleotide sugars
staw01100
Metabolic pathways
staw01110
Biosynthesis of secondary metabolites
staw01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCG89_07305 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCG89_07305 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NCG89_07305 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCG89_07305 (rfbB)
00525 Acarbose and validamycin biosynthesis
NCG89_07305 (rfbB)
Enzymes [BR:
staw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NCG89_07305 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
Sacchrp_dh_NADP
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
USA44831
LinkDB
All DBs
Position
complement(1589728..1590780)
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AA seq
350 aa
AA seq
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MKTILVTGGAGFIGSAVVRHILSETDFSVVNVDALTYAGSLDAIPIALQRSHYVFERADV
CDGKRMAELLERYRPDVLMHLAAETHVDRSIEGPDYFIRTNFVGTYTLLEAVRVYWQGLS
VDRRKAFRFHHVSTDEVYGDLGARPEWLATEDCAYAPSSPYAASKAGADHLVRAWARTYG
LPVVLSACSNNYGPYQYPEKLIPRMISCALAGRPLPVYGDGNQMRDWLYVEDHARALLEV
ACRGEVGHTYNIGARCEQRNIDVVRAVCELLELLAPNNRHSRVSGAGYAQLIRFVSDRPG
HDARYAVDPSKLEATLGWRPRERFSEGLHKTVQWYLDHPEWRQRGGSIES
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacaattctcgtgaccggtggcgccggttttatcgggagcgcggtcgttcgccat
attctttccgaaacggatttcagcgttgttaatgtcgatgccctgacctatgccggtagt
ctcgacgctatccccatcgccctgcagcgttcgcactatgtctttgagcgcgctgatgtt
tgcgacggcaaaagaatggccgaattgcttgagcgttatcgccccgatgtactgatgcac
ctcgctgcagagactcatgtggatcgctcgattgaggggccggattacttcattcgaaca
aacttcgttggcacttataccctgttggaggcggtgcgcgtttattggcagggcctgtcg
gttgatcgcagaaaggccttccgttttcatcatgtgtccactgatgaggtctatggcgac
cttggtgcgcggccggaatggctcgccaccgaggattgtgcttacgcccccagctcaccc
tacgccgccagtaaagcgggcgcggatcaccttgttagagcctgggcgcgcacctacggc
ttgcccgttgtgttgtcagcgtgctcaaacaactacggcccgtatcaatatccggagaag
ttgatacccaggatgatttcctgtgcgctcgccggtaggccactgcctgtttacggtgac
ggaaaccaaatgcgagactggttgtatgttgaggatcacgcacgggccctgctggaggtc
gcctgtcgcggtgaagttggccatacctacaatatcggtgcgcgctgcgaacaacgaaat
atcgatgtagtccgggcggtttgtgagcttctggagttattggcgccgaacaatcggcat
tcccgcgtgtcaggagcagggtacgcccagttaattcggttcgtatcggaccgtcccggt
catgatgctcggtacgccgttgatccgagcaagcttgaggccactttagggtggcgtcct
cgggagcgttttagcgaggggttacacaaaaccgttcagtggtatctcgaccaccccgaa
tggcggcagcgcggcggcagtatcgagtcctag
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