Spongiibacter taiwanensis: NCG89_08815
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Entry
NCG89_08815 CDS
T08367
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCG89_08815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
staw03400
]
NCG89_08815
Enzymes [BR:
staw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCG89_08815
DNA repair and recombination proteins [BR:
staw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCG89_08815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
MbtH
Motif
Other DBs
NCBI-ProteinID:
USA41621
LinkDB
All DBs
Position
1916744..1917529
Genome browser
AA seq
261 aa
AA seq
DB search
MRIISFCADSIVDAAKKGFFDWVTEQDADIICLQNLGIAEYKLRDDVYFPREYNPYFFDA
ADGKSNGVAIYTRKLPKAIMTGLGFLDFDMEGRYIQADFDDISIGSLLAPSAYNLDANAQ
ARKNQFFEQYMNHLTKVRNKRRDFIICGNWNIAHRSIDVQNVKENHGVSGNLPEEQQWMD
RLFREQSYSDAFRLVTTDADEFSWWPDGTPGENGWRVDYQVVSERMKPRVEFGAIYKVQQ
FGQHAPVIMDYDYEMPEDETW
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagaattatcagcttttgcgctgacagcattgtcgatgccgcaaaaaaaggctttttt
gattgggtgaccgagcaggacgccgacatcatttgcctgcagaatctgggcattgccgag
tacaagctccgggacgatgtttacttccccagagagtacaacccctatttcttcgacgcc
gccgacggcaaaagcaacggcgtggcgatctatacccgcaagctgcccaaggccatcatg
accggcctgggctttctcgactttgacatggaaggccgttacatccaggccgatttcgac
gacatcagtattggcagcctgctggccccgtccgcctacaacctggatgccaatgcccag
gcgcgcaaaaatcagttctttgagcagtacatgaaccatctgaccaaagtgcgcaataag
cgtcgggacttcattatttgcggcaactggaatatcgcccaccgcagcattgacgtgcag
aacgtgaaggaaaaccacggtgtatccggcaacctgcccgaagaacagcagtggatggat
cgcctgttccgggagcaaagctactccgacgctttccgcctggtaacaacggatgcagac
gagttcagctggtggcccgacggcacccccggcgaaaacggctggcgggtggattatcag
gtggtctccgagcgaatgaagccccgggttgagtttggcgccatctataaagtgcagcaa
tttggtcagcacgcgccggtgatcatggactacgactatgaaatgccggaagacgagacc
tggtaa
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