Spongiibacter taiwanensis: NCG89_09475
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Entry
NCG89_09475 CDS
T08367
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw03030
DNA replication
staw03410
Base excision repair
staw03420
Nucleotide excision repair
staw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCG89_09475 (polA)
03410 Base excision repair
NCG89_09475 (polA)
03420 Nucleotide excision repair
NCG89_09475 (polA)
03440 Homologous recombination
NCG89_09475 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
staw03032
]
NCG89_09475 (polA)
03400 DNA repair and recombination proteins [BR:
staw03400
]
NCG89_09475 (polA)
Enzymes [BR:
staw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCG89_09475 (polA)
DNA replication proteins [BR:
staw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCG89_09475 (polA)
DNA repair and recombination proteins [BR:
staw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCG89_09475 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCG89_09475 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
KDGP_aldolase
HHH
XPG_N
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
USA41747
LinkDB
All DBs
Position
complement(2048193..2050925)
Genome browser
AA seq
910 aa
AA seq
DB search
MTAPAPLVLVDGSSYLYRAFHAMFKADLRNSAGQPTGAVRGVISMLRRLQKDYPDSPIAV
VFDAKGKTFRDEMFEQYKAQRPPMPDDLRLQVQPINDIIDAMGLPRLVIDGVEADDVIGT
LAAQAGSERPVIVSTGDKDMAQLVNAHVTLVNTMTETVLDERGVEEKFGLPPRLIIDYLA
LMGDKVDNIPGVPGVGEKTALALLQGLGSLEEIYANLDKVAELEVRGAKSLGKKLADNRE
MAELSYKLATIKCDVELELDLAALTPTPPDNDKLLALFQEMEFKSWIEELSGGDAGDTDD
GGAAKTAAETDYQLVLTQADFDAWLEKLKAAELFAFDTETTALEYMQARVVGVSFAVTPG
EAAYVPFGHDYLDAPDQLSEEQVLGALKPLLEDPKVAKLGQNLKYDAHVLANHGIIMQGI
SDDTMLESYVLDSTASRHDMDSLALKYLGHSTIHFEDIAGKGAKQLTFNQIALEQAGPYA
AEDADITLRLHQALSAKLEQHPSLMSVYREIELPLVPVLTRIEHNGALVSRDMLAKQSQE
LGEKIQALELEAHELAGGPFNLSSPKQLGEILFEKLEIPVIKKTPKGAPSTAEEVLVELA
HDYPLPKVILDYRGMAKLKSTYTDKLPLLIDPKTGRIHTSYHQAVAATGRLSSSDPNLQN
IPIRTPEGRRIRKAFIAPEGYKILAADYSQIELRIMAHLSGDKGLIDAFAKGEDIHRATA
AEVFGVAVDEVSDEQRRNAKAINFGLIYGMSAFGLARQLHIGRNEAQEYIDLYFARYPGV
LRYMDDTRKLAAEKGYVETLFGRRLHLPEINASNGQRRQAAERTAINAPMQGTAADIIKR
AMIAVDEYLASEKPDAKIIMQVHDELVLEVAEEQIDAVSKKIEALMAGAAKLDVPLEVGL
GVGDNWDEAH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcctgccccgctggtactggtagatgggtcttcctatctctaccgcgccttt
cacgccatgttcaaagccgatctgcgcaactccgctggccagcccaccggcgcggtgcgg
ggggtgatcagcatgctgcggcgcctgcagaaggattaccccgacagccccattgcggtg
gtctttgacgccaagggcaaaacctttcgggatgagatgtttgagcagtacaaggcccag
cgcccgcccatgcccgatgacctgcggctgcaagtgcagcccattaacgacatcatcgac
gccatgggtctgccccggctggtgattgacggtgtagaggccgacgacgtgatcggcacc
ctggccgcccaggcgggcagcgagcggccggtgattgtctccaccggcgacaaggatatg
gcccagttagtgaatgctcacgtcaccctggtcaacaccatgaccgaaacggtgctggat
gagaggggtgtagaggaaaagtttggcctgccgccccgcctgatcatcgattatcttgcc
ctgatgggcgataaagtcgacaacatccccggtgttcctggcgtcggcgaaaaaaccgcc
ctggctctgctgcaggggctgggcagcctggaagagatctacgccaatctggataaagtc
gccgagctggaggtacggggcgccaaaagcctgggcaaaaagctggccgacaaccgggaa
atggccgagctgtcctacaagctggccaccatcaaatgcgatgtggagctggagctcgat
ctggccgccctcaccccgaccccgcccgacaacgacaaactgctggccctgtttcaggaa
atggaatttaagtcctggattgaagagctgtctggtggtgatgccggtgatacggacgat
ggcggcgcggccaaaacggctgccgagaccgattatcagttagtactcactcaggcggat
ttcgacgcctggcttgaaaagctcaaggccgccgagctgttcgcctttgataccgaaacc
actgccctggaatatatgcaggccagagtggtcggcgtgtccttcgccgttacccccggc
gaagccgcctatgtgccctttggtcacgactatctggatgcccccgaccagctcagcgag
gagcaggtactgggcgccctcaagcccctgttggaagaccccaaggtggccaagcttggc
cagaacctgaagtacgacgcccatgtactggccaatcacggcatcatcatgcagggcatc
agtgatgacaccatgctggagtcctacgtgctggactccactgccagccgccacgacatg
gacagcctggccctgaaatacctgggtcacagcaccatccattttgaagacattgccggc
aaaggcgccaagcagcttacttttaaccagatcgccctggagcaggccggcccctatgcc
gctgaggatgccgacattaccctgcgtctgcatcaggcgctgtccgccaagctggagcag
cacccctcgctgatgtcggtctatcgcgaaattgaactgccgctagtgccagtgctcacc
cgcattgaacataacggcgccttggtcagtcgggatatgctggccaagcagagtcaggag
ctgggcgagaagattcaggccctcgagctggaagcccacgagctggcgggcgggcctttt
aacctgtcctcccccaaacagctgggcgaaatcctgtttgaaaagctggaaatcccggtc
attaaaaagacccccaagggcgcgccctccaccgcggaagaggtgttggtggagctggcc
cacgactaccccctgcccaaggtgatactggactaccggggcatggccaagctcaaatcc
acctacaccgacaaactgcccctgctgatcgaccccaaaactggccgcattcacacctcc
taccaccaggcggtggcggccaccgggcggctgtcctcctccgaccccaacctgcaaaac
atccccatccgcacccccgaggggcggcgcatccgcaaagcctttattgcccccgagggc
tacaagatattggcggcggactactcccagatcgagctgcgcatcatggcccacctctct
ggcgacaaaggcctgatcgacgcctttgccaaaggcgaggatattcaccgggcaacggcg
gcggaagtgtttggtgtggcggtcgatgaagtcagcgacgaacagcgccgcaacgccaag
gccatcaacttcggtttgatctacggcatgtcggccttcggtctggcccgccagctccat
attggccgcaacgaggcccaggaatatatcgacctctactttgcccgctaccccggcgtg
ctgcgttacatggacgacacccgcaaactcgccgccgaaaaaggctatgtagaaaccctg
tttggccgccgcctgcacctgccagaaatcaacgccagcaacggccagcgccgccaggcc
gccgaacgcaccgccatcaacgcccccatgcaaggcaccgccgccgatatcatcaagcgg
gccatgattgcggtggatgaatacctcgccagcgaaaaacccgacgccaaaattattatg
caggtgcatgatgaactggtgctggaagtggccgaagagcagatcgatgccgtcagcaaa
aaaattgaagcgctaatggctggggcggccaaactggatgtgccgctggaggttggtttg
ggtgtgggggataactgggatgaggcgcattag
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