Spongiibacter taiwanensis: NCG89_10800
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Entry
NCG89_10800 CDS
T08367
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00260
Glycine, serine and threonine metabolism
staw00460
Cyanoamino acid metabolism
staw00630
Glyoxylate and dicarboxylate metabolism
staw00670
One carbon pool by folate
staw00680
Methane metabolism
staw01100
Metabolic pathways
staw01110
Biosynthesis of secondary metabolites
staw01120
Microbial metabolism in diverse environments
staw01200
Carbon metabolism
staw01230
Biosynthesis of amino acids
staw01240
Biosynthesis of cofactors
staw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCG89_10800
09102 Energy metabolism
00680 Methane metabolism
NCG89_10800
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCG89_10800
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NCG89_10800
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NCG89_10800
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NCG89_10800
Enzymes [BR:
staw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NCG89_10800
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Motif
Pfam:
SHMT
Aminotran_1_2
OKR_DC_1
Aminotran_5
DUF3863
Motif
Other DBs
NCBI-ProteinID:
USA42010
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All DBs
Position
2334528..2335790
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AA seq
420 aa
AA seq
DB search
MFDKEMTIAGFDAEIWSAIQEEEVRQEEHIELIASENYTSPAVMQAQGTVLTNKYAEGYP
GKRYYGGCEYVDKAEDLAIARAKALFGADYANVQPHSGSQANAAVYQALVLPGETVLGMS
LDAGGHLTHGAKPNFSGKTYNAVQYGLNNETGEIDYAQVEALALEHKPKMIVAGFSAYSG
IVDWAKFREIADKVGAYLMVDMAHVAGLVAAGVYPNPVPVADVVTTTTHKTLRGPRGGLI
LARANEEIEKKLNSAVFPGGQGGPLMHVIAAKAVSFKEAQSPEFVTYQKQVVANAQAMAK
TFIERGINIVSGGTQNHLMLVDLIGKSYTGKDADAALGAANITVNKNAVPNDPRSPFITS
GLRVGTPAVTTRGFKEAECVELAGWMCDVLEALEAGDASAKIEEVKGKVLEICKRFPVYA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaaagaaatgaccattgctggatttgatgcagagatctggtctgccattcaa
gaggaagaggttcgtcaggaagaacatatcgagttgattgcttccgagaactataccagc
ccggcggtcatgcaggcccagggtaccgtactgaccaacaagtacgcagaaggttacccc
ggcaagcgctactacggtggctgtgagtatgtggacaaggccgaagatctggccattgcc
cgggccaaggccctgttcggcgccgactacgccaacgttcagccccactccggctctcag
gcgaatgccgctgtgtatcaagcgctggtgctgcccggcgaaaccgtactgggcatgagc
ctggacgcgggcggtcacctgacccacggcgccaagcccaacttctccggcaaaacctac
aacgcggtgcagtacggtttgaacaatgagaccggtgagatcgactacgcccaggttgag
gcgctggccctggagcacaagcccaagatgatcgtggccggcttctctgcttactccggc
attgttgactgggcaaaattccgtgaaatcgctgacaaagtcggtgcctacctgatggtg
gatatggcccacgtggccggactggttgccgcgggtgtgtaccccaacccggtgccggtt
gccgacgtggtgaccaccaccacgcacaagaccttgcgcggcccccgcggtggtctgatt
ctggcccgtgccaatgaagagatcgagaagaagctgaactccgcggtattccccggtggt
cagggcggcccgctgatgcacgtgattgcggccaaagcggtcagcttcaaagaggcccag
agccccgagtttgtcacttaccagaagcaggtggtggctaacgcccaggccatggccaag
acctttatcgagcgcggcattaacatcgtctccggcggaacccagaaccacctgatgctg
gtggacctgattggtaagtcctacaccggtaaggacgccgatgcggccctgggtgcggcg
aatatcaccgtaaacaagaatgcggtgcccaatgatccgcgttcgccgtttatcaccagc
ggtctgcgcgtgggtaccccggcggtaaccactcgtggcttcaaagaagcggagtgcgtt
gagctggctggctggatgtgcgacgtgctggaagccctggaagccggtgatgcctctgcc
aagatcgaagaagtgaagggcaaagtgctggagatttgtaagcgctttccggtgtatgcc
tga
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