Spongiibacter taiwanensis: NCG89_11375
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Entry
NCG89_11375 CDS
T08367
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00300
Lysine biosynthesis
staw00470
D-Amino acid metabolism
staw01100
Metabolic pathways
staw01110
Biosynthesis of secondary metabolites
staw01120
Microbial metabolism in diverse environments
staw01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCG89_11375 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCG89_11375 (dapF)
Enzymes [BR:
staw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCG89_11375 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
USA44851
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All DBs
Position
complement(2457932..2458762)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFVVIDLITQRFKIKPHHIRKIADRHFGIGCDQVLLVEIPSQPDVDF
CYRIYNAEGSEVEQCGNGARCFARYVRDKRLTGKKSIKVETLAGIIELEVTDNRQVRVDM
GEPILDPKRIPFTAPEQQSTYDLDVNGVHWQVGAVSMGNPHVILSVPDVDSAPVETVGPV
VESHSRFPQRVNVGFCQIISRTQLRLRVFERGVGETLACGTGACAAVVSGIVQGQLDHCV
EVTLPGGALAIEWQGLGHPVIMTGPATTVFEGQIQL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacgcttcacaaaaatgcatggcctgggcaacgactttgtggtgatagacctc
atcacccagcgcttcaaaatcaaaccccaccatattcgtaagattgccgaccgccatttt
ggtatcggctgcgaccaggtgctgctggtcgagatcccgagccaacccgacgtcgacttc
tgctaccgcatctacaacgccgaaggcagcgaggtagagcaatgcggcaatggcgcccgc
tgcttcgcccgctatgtgcgcgacaagcgcctgaccggcaagaaatccatcaaggtggaa
accctcgccgggatcattgagctggaggtcaccgacaatcgtcaggtgcgggtggatatg
ggcgagcccattctcgaccccaagcgcatccccttcaccgcccccgagcagcaaagcacc
tacgacctcgacgtcaatggtgtgcactggcaggtcggcgcggtatcgatgggcaacccc
catgtcattctgtcggtacccgacgtggactccgccccggtcgagactgttggcccggtt
gtggaaagccacagccgcttcccccaacgcgtcaatgtgggcttttgccagatcatcagc
cgcacccaactccgcttgcgggtgttcgagcgcggcgtgggcgaaaccctggcctgcggc
accggcgcctgcgccgccgtcgtcagtggcattgtgcagggccagctggatcattgtgtt
gaggtcaccctgccgggcggcgcgctggctattgagtggcaggggctaggccaccccgtt
atcatgaccggacccgcaacaacggtctttgaaggccaaattcaactatag
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