Spongiibacter taiwanensis: NCG89_11400
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Entry
NCG89_11400 CDS
T08367
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCG89_11400 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
staw03400
]
NCG89_11400 (mutM)
Enzymes [BR:
staw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCG89_11400 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCG89_11400 (mutM)
DNA repair and recombination proteins [BR:
staw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCG89_11400 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
USA42126
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All DBs
Position
2467154..2467972
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AA seq
272 aa
AA seq
DB search
MPELPEVETVCRGVSPHLLGRKITQVTVRNGALRWPVPADLPIKLQGQQVISLQRRAKYL
LVEFAAGWMIVHLGMSGRLYLVEGGTAVAKHDHVDWQLDNGRVLRYTDPRRFGAVLWVEG
AVTSNHVLLRHLGPEPLSEEFSGDYLHRKSQGRKQPIKTLLMDGRVVVGVGNIYANEALF
MAGIRPTRAAGAISKARVRVLVDAVKEVLAKAIAQGGTTLKDFVGGDGKPGYFKQELLVY
GRAGLPCVRCQTPLREIRLAQRTTVYCSECQR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaattacctgaagtagaaacggtgtgtcgcggcgtaagcccccatttgctgggc
cgcaaaatcactcaggtgacggtgcgcaatggcgcgctgcgctggcctgtccccgcagac
ttgccgataaagttgcagggccagcaggtgatctctctccagcgtcgagccaagtatctg
ctggtggaatttgccgccggctggatgatcgttcaccttggcatgtcagggcgtctctat
ctggttgaaggcggcaccgccgttgcaaaacacgatcatgttgattggcagttggataac
ggtcgggtgttgcgctacaccgatccgcgccgctttggtgccgttttgtgggtggagggc
gctgtcacaagcaaccacgtgttgctacgccacttggggccggagccgctctcagaggag
tttagcggtgactaccttcaccgcaaatctcaaggtcgaaagcagccgatcaagacattg
ttaatggacgggcgcgtagtggtcggtgtagggaatatctacgcgaatgaagccttgttt
atggccggaatccggcccacccgcgccgcaggcgccattagcaaggctcgagtgcgagtg
ttggttgatgcggtgaaagaggtgctcgcgaaagcgatcgcgcaaggtggcacgacgcta
aaagactttgtgggaggtgacggcaaaccgggttatttcaagcaggagctgctggtctat
ggtcgcgccggcttgccttgtgtgcgctgccaaacaccgttgagggaaattcgcttggcc
cagcgcaccacagtttattgttcggaatgtcagcgctga
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