Spongiibacter taiwanensis: NCG89_12865
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Entry
NCG89_12865 CDS
T08367
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
staw
Spongiibacter taiwanensis
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
staw03016
]
NCG89_12865 (truB)
Enzymes [BR:
staw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCG89_12865 (truB)
Transfer RNA biogenesis [BR:
staw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCG89_12865 (truB)
Prokaryotic type
NCG89_12865 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
USA42416
LinkDB
All DBs
Position
2821178..2822104
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AA seq
308 aa
AA seq
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MGRKRKGRDISGILLLDKPPGRTSNSAMVVCRAIYNAAKAGHTGALDPLATGVLPVCFGE
ATKFSQYLLDADKAYRSTFVFGQQTNTADADGEVIAEADASDLTEALLNERIADFRGDIE
QVPPMYSALKKDGRPLYELARKGIEIERQARPVTIYEYELEHFEPGVQAKAVVRVRCSKG
TYIRSLAEDLGQQLGVGAHVATLRRIAAGPFTEQGVVSLDVLQQLRDAEDFAGLDTLLIP
VEQALGHLPAIHLGDSAAHFLRQGQAVFHPGAGQSGTTTLFDHQGRFMGIGEILDDFRVK
PRRLIANM
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgggtcgcaagcgcaaaggccgcgatatcagcggcattctgctattggataaaccccct
ggccggacatccaattcggcgatggtggtgtgtcgcgctatttataacgcggccaaggcg
gggcataccggcgccctggatcctctcgcgaccggggtgttgccggtctgctttggtgag
gcaaccaagttttctcaatatctgctcgatgccgacaaggcgtatcgcagtacctttgtg
tttggtcagcagaccaataccgcagatgcagatggtgaggtgatcgccgaggcggatgcc
tccgatctcactgaagccctcctcaatgagcggatcgcagactttcgcggtgacatcgag
caggttccccccatgtactccgcgctaaaaaaggatggtcgtccgctttacgagctggcc
cggaaggggattgagattgagcgccaggcgcggccagtaacaatatatgagtacgagttg
gagcactttgaaccgggtgttcaggccaaggcggtagtccgtgtgcgctgcagcaagggc
acctatatccggtcgctggcggaggatctcggccagcaactgggcgtcggtgctcatgtg
gcgaccctgcgtcgtattgcggccggaccctttactgaacaaggggtggtgtcgttagat
gtcttgcagcagttgagggatgcggaggatttcgcgggtctcgacaccctgctgataccc
gtcgagcaggcccttggccatctgccagccattcatctaggcgatagtgcggcccacttt
cttcgtcaggggcaggcggtatttcacccaggtgccgggcagagcgggaccacgacgctg
tttgatcatcaggggcgctttatgggaatcggagaaattttggacgattttcgggtgaaa
cctcgccgcttgattgcaaatatgtga
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