Spongiibacter taiwanensis: NCG89_13065
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Entry
NCG89_13065 CDS
T08367
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NCG89_13065 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
staw03019
]
NCG89_13065 (orn)
03009 Ribosome biogenesis [BR:
staw03009
]
NCG89_13065 (orn)
Messenger RNA biogenesis [BR:
staw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCG89_13065 (orn)
Ribosome biogenesis [BR:
staw03009
]
Eukaryotic type
Pre-60S particles
RNases
NCG89_13065 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
USA42456
LinkDB
All DBs
Position
2869564..2870103
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AA seq
179 aa
AA seq
DB search
MSKKTNLIWIDLEMTGLDTLNDHIIEIATVVTDSELNVLAEGPMLAIHQSDEVLNGMDEW
NTRQHGSSGLTKRVRETCMTADEAERLTLAFLDNYSESGASPMCGNSICQDRRFLAREMP
KLEAYFHYRNLDVSSLKELARRWRPEIMAGLKKGSSHLALDDIRDSIAELQYYREHFIR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaccaatttgatctggatagacctggaaatgaccgggctggatactctg
aacgatcacattattgaaatcgctaccgtggtcactgacagcgagttgaacgtgttggct
gaagggccaatgttggcgattcatcaaagcgatgaggtgctcaatggtatggatgagtgg
aatactcgccagcatggcagttcgggcttaaccaagcgagtcagagaaacctgcatgacc
gccgacgaggcggagcgcctgaccctggcgtttttggataactacagtgagtcaggcgcg
tcacccatgtgcggcaatagcatctgtcaggaccggcgatttttggcgcgtgaaatgccc
aagcttgaggcatattttcactatcgcaacctcgatgtgagcagcctgaaagagctggct
cgacgctggcgaccagagattatggcgggtttaaagaagggcagctcccatttggcgctg
gatgatattcgcgattccatcgccgagctgcagtattaccgggagcattttattcgctga
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