Sphingomonas taxi: MC45_02420
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Entry
MC45_02420 CDS
T03398
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
stax
Sphingomonas taxi
Pathway
stax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MC45_02420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stax03019
]
MC45_02420
Messenger RNA biogenesis [BR:
stax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MC45_02420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AIT05444
UniProt:
A0A097ECZ7
LinkDB
All DBs
Position
complement(552742..553242)
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AA seq
166 aa
AA seq
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MSNDANARLPYRPCAGVMLVNRDGKVFVGQRIDTILEAWQMPQGGIDPGEDAYAAAVREL
GEETGISPDKVELVAEASDDFFYDLPDDMVGKVWKGKWRGQRQRWFLFRFLGEDADVRID
TPHPEFRAWRWSDPDDLPTLIVPFKRDLYTAVLAAFRPQLGADQTG
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacgccaacgcccgcctgccctaccgtccttgcgccggcgtcatgctggtc
aaccgcgacggcaaggtcttcgtcggccagcgcatcgatacgatcctggaggcatggcag
atgccgcagggcgggatcgatcccggcgaggacgcctatgcggcggcggtccgcgagctc
ggcgaggagacggggatttcgcccgacaaggtcgaactggtcgccgaggcgtcggacgac
ttcttctacgacctgcccgacgacatggtcggcaaggtgtggaagggcaaatggcgcggc
cagcgccaacgctggttcctgttccgcttcctcggcgaggatgccgacgtgcggatcgac
acgccccaccccgaattccgcgcctggcgatggagcgatccggacgacctgccgacgctg
atcgtgccgttcaaacgcgatctttatacggccgtgctcgccgcgttccggcctcagctc
ggcgcagaccaaacggggtga
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