KEGG   Sphingomonas taxi: MC45_03335
Entry
MC45_03335        CDS       T03398                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
stax  Sphingomonas taxi
Brite
KEGG Orthology (KO) [BR:stax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:stax03016]
    MC45_03335
Enzymes [BR:stax01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     MC45_03335
Transfer RNA biogenesis [BR:stax03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MC45_03335
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AIT05595
UniProt: A0A097EDI8
LinkDB
Position
766276..767451
AA seq 391 aa
MHIHPLITDSASLANLCARLANADFVTVDTEFMRESTYYPELCLIQIADVNEAAAIDPMA
PGLDMTPLLELLTENQDVLKVVHAGGQDIEIIYNLTGKTPHPLFDTQVAAMALGQGEQIG
YSNLVDSWLGIVVDKGARFTDWARRPLDARQIEYAIGDVTHLAVIFPKMLERLRKTGRGV
WLDQEMERLADPANYANDPDQAWKRVRISGRKPDVLGRLKALARWRELEAQSKDLPRGRI
VKDETLGDIAGHPPRKQADLAKVRGLSATWASNDIGGRLMAAIESAAPLGADELPPRDDR
KPGLGKEGALVADLLKLLLKIRSRDIDVASRLLARSEELEALAAGVRTGLPMLEGWRFDQ
FGRDALDLVEGRLGFAVRGGKLKMTRTEEAA
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgcatatccacccgttgattacagacagcgccagcctcgccaatctgtgtgcccgcctc
gccaatgccgacttcgtgaccgtcgacaccgaattcatgcgcgagagcacctattacccc
gaattgtgcctgatccagatcgccgacgtgaacgaggcggcggcgatcgatccgatggcg
ccggggctcgacatgacgccgctgctggaattgctcaccgagaatcaggacgtgctcaag
gtggtccatgccggcgggcaggacatcgagatcatctacaatcttaccggcaagacgccg
catccgctgttcgatacgcaggtcgcggcgatggcgctggggcaaggcgagcagatcggc
tattccaacctagtcgacagctggctcggcatcgtcgtcgacaagggcgcgcgcttcacc
gactgggcgcggcggccgctcgatgcgcggcagatcgaatatgcgatcggcgacgtgacg
catctcgcggtgatcttccccaagatgctcgaacggctgcgcaagaccgggcgcggcgtg
tggctcgaccaggagatggagcggctcgccgacccggccaattacgccaacgatcccgat
caggcgtggaagcgcgtgcgcatctccgggcgcaagcccgacgtgctcgggcggctcaag
gcgctggcgcgctggcgcgagctggaggcgcagtcgaaggacctgccgcgcgggcggatc
gtcaaggacgagacgctgggcgacatcgccggccatccgccgcgcaaacaggccgatctc
gccaaggtgcgcggcctgtcggcgacctgggcgtcgaacgatatcggcgggcggctgatg
gcggcgatcgaatcggcggcaccgcttggcgccgacgagctgccgccgcgcgacgaccgc
aagccggggctgggcaaggagggcgcgctggtcgccgatctgctcaaactgctgctcaag
atccgctcgcgcgatatcgacgtcgcgtcgcgcctgctggcgcggtcggaagagctggaa
gcgctcgccgccggggtgcgcaccgggttgccgatgctggagggctggcggttcgaccag
ttcgggcgcgatgcgctcgatctggtcgaggggcggctcggcttcgcagtgcgcggcggc
aagctcaagatgacgcgaacggaggaagcagcatga

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