Sphingomonas taxi: MC45_04230
Help
Entry
MC45_04230 CDS
T03398
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stax
Sphingomonas taxi
Pathway
stax03030
DNA replication
stax03430
Mismatch repair
stax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MC45_04230
03430 Mismatch repair
MC45_04230
03440 Homologous recombination
MC45_04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stax03032
]
MC45_04230
03400 DNA repair and recombination proteins [BR:
stax03400
]
MC45_04230
Enzymes [BR:
stax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MC45_04230
DNA replication proteins [BR:
stax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MC45_04230
DNA repair and recombination proteins [BR:
stax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MC45_04230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
COE1_HLH
DUF655
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
AIT05741
UniProt:
A0A097EDU9
LinkDB
All DBs
Position
complement(948727..952227)
Genome browser
AA seq
1166 aa
AA seq
DB search
MAHSGFVPLRIFSSYTMLDGAIEPKAIAKQAKAMRFPAAGLTDRNGLYAAMAFSDAAKKD
GVQPVIGTMLCVARPGMPDGVAVPLDWIALYAQDATGYDNLCALVSLAHLERPIELPAHV
DFAALEGRTDGLIALTAGGEGALARLIHEDQPDRAAAYLDRLQALFPDRLYIELARRSDV
IEETAEQALVDFAYDRNLPLVATNPCCFSDSAFLDAHDAMLCIAHSTYVESEDRIRSCPD
AWLKPAETMRELFSDLPEAIDNTLVVAQRCAVMAPYRKPILPSLAGDREGEAAMLRAEAA
AGLEKRLDRIEALGTQPADDPDWRDVYRKRLAFEVDVIVQMGFPGYFLIVGDFIKWAKDH
DIPVGPGRGSGAGSVVAWALTITDLDPMKLGLLFERFLNPERVSMPDFDIDFCETRRGEV
IRYVQEKYGRDQVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNHPTDPWDLK
RALNGVPELAKEYSNDNQVRRLLDLATKLEGLPRHSSTHAAGVVIGDRPLAQLVPLYRDP
RSDMPVTQFDMKYVEGAGLVKFDFLGLKTLSVLKKAVQLLAKRGISVDLDALLWDDEAVY
KLLQKGDTVGVFQLESEGMRRTLSAVRPTNFGDIIALVSLYRPGPMDNIPSFGRRKQGTE
PIVYPHDLLEPILSETYGIFVYQEQVMQAAQILAGFSLGGADLLRRAMGKKIKAEMDAQR
AIFVEGCAKVNGIPKNKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHHPEEFY
AASMCYDMAQTDKLCIFVDDMRRLGVTICGPDINKSDAEFDVEATEDGGLAVRYALAALK
SVGEGAMEKLVVERSTNGPFKSIDDLATRVDPRLINKRQLETLAASGTFDCFDPNRAGIH
AVAETILAVAARTHEGKTSGQHGLFGAEDVAGDAIKLPASVRWSMADAMEQEKEAFGFYF
SAHPVDRHAHLAKMHGARQYVALTELNIPEDGTRAGATMAVLVEDARWRTSARGKRYMMA
TLSDASGQFVATCFDDSVAAELEDAARCGGCGLITVELDRRPGEETPRVSVKRIQPFEGL
ASIARFTIAARVAHVTAFEALSALLAHHRGARGEVRAHIPVGEGEATVLLGRDFLLDMEL
VETIQAIPGISDVALDRVASQLRSVG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggctcattccggtttcgtaccgctccgcattttctcgtcctacacgatgctcgacggg
gcgatcgagcccaaggcgatcgccaaacaggcaaaggcgatgcgtttccccgccgccggc
ctgaccgatcgcaacggcctctatgcggcgatggccttttccgatgccgccaagaaggac
ggcgtccagccggtgatcggcacgatgctgtgcgtcgcgcggcccggcatgcccgacggc
gtcgccgtcccgctcgactggatcgccctctatgcgcaggatgcgacgggctatgacaat
ctgtgcgcgctggtcagtctcgcgcatctcgaacggccgatcgaactgcccgcgcatgtc
gatttcgccgcgctggaggggcgcaccgacggcctgatcgcgctgaccgcgggcggcgag
ggcgcgctggcgcgattgatccacgaggaccagccggatcgcgccgccgcctatctcgac
cggttgcaggcgctgttccccgaccgcctctatatcgaactggcccgccgcagcgacgtg
atcgaggagaccgccgaacaggcgctggtcgacttcgcttatgatcgcaacctgccgctg
gtcgcgaccaatccctgctgcttctccgacagcgcctttctcgacgcgcacgatgcgatg
ctgtgcatcgcgcactcgacctatgtcgagagcgaggaccgcatccgctcctgccccgac
gcatggctcaagcccgccgagacgatgcgcgaactcttctccgacttgcccgaggcgatc
gacaacaccttggtcgtcgcgcagcgctgcgcggtgatggcgccctatcgcaagccgatc
ctgcccagcctcgccggcgatcgcgagggcgaggcggcgatgctgcgcgccgaggcggcg
gcggggctggaaaagaggctcgaccggatcgaggcactcggcacccagcccgccgacgac
cccgactggcgcgacgtgtatcgcaagcggctcgcgttcgaggtcgacgtcatcgtccag
atgggtttccccggctatttcctgatcgtcggcgacttcatcaaatgggcgaaggatcac
gacattccggtggggccggggcgcggctcgggcgccggctcggtcgtcgcctgggcgctg
acgatcaccgatctcgatccgatgaagctcggcctgctgttcgaacgcttcctcaacccg
gaacgcgtctcgatgcccgacttcgacatcgacttctgcgaaacgcggcgtggcgaggtc
atccgctacgtgcaggagaaatatgggcgcgatcaggtcgcgcagatcatcaccttcggt
aagctgaaggcgcgcgcggtgctcaaggacaccggccgcgtcctccagatgagctacggc
caggtcgatcgcctcgccaagctcgtccccaaccatccgaccgatccgtgggacctcaag
cgcgcgctcaacggcgtacccgagctcgccaaggaatattcgaacgacaatcaggtccgc
cgcctgctcgatctggcgacgaagctggagggcctgccgcgccactcgtcgacgcacgcc
gccggcgtggtgatcggcgaccgcccgctcgcgcaactggtgccgctctaccgcgaccca
cgctcggacatgccggtcacccagttcgacatgaagtacgtcgagggcgccggcctggtg
aagttcgacttcctcggcctcaagaccctgtcggtgctcaagaaggcggtgcagttgctc
gccaagcgcggcatcagcgtcgatctcgacgctttgctatgggacgacgaggcggtctac
aaactgcttcagaagggcgacacggtcggtgtgttccagctcgaatcggaaggcatgcgc
cgcacgctcagcgccgtgcgcccgaccaatttcggcgacatcatcgcgctcgtctcgctc
taccgccccggcccgatggacaatattccgagcttcggccgccgcaaacagggcaccgag
ccgatcgtctatccccacgacctgctcgaaccgatcctgtccgagacctacggcatcttc
gtctaccaggaacaggtgatgcaggcggcgcagatactcgccggcttctcgctcggcggc
gccgatctgctgcgccgcgcaatgggcaagaagatcaaggcggagatggacgcgcagcgc
gcgatcttcgtcgagggctgcgccaaggtgaacggcatacccaagaacaaggcgaacgaa
ttgttcgacttgatcgacaagttcgccggctatggcttcaacaagagccacgccgccgcc
tacgcgctgctcgcctatcagaccgcgtggctgaaggcgcatcacccggaggaattctac
gccgcgtcgatgtgctacgacatggcgcagaccgacaagctctgcatcttcgtcgacgac
atgcgccggctgggggtgacgatctgcggccccgacatcaacaagagcgacgccgaattc
gacgtcgaggcgaccgaggatggcggccttgccgtccgctacgcgctcgccgcgctgaag
tcggtcggcgagggggcgatggagaagctcgtcgtcgagcgcagcaccaacggtccgttc
aagagcatcgacgatctcgccacccgcgtcgatccgcgcctcatcaacaagcgccagctc
gaaacgctcgccgccagcggcacgttcgactgtttcgatcccaaccgcgccggcattcac
gccgtcgccgagacgatcctcgccgtcgccgcccgcacccacgagggcaagaccagcggc
cagcacggcctgttcggcgccgaggatgtcgccggcgatgcgatcaagctgcccgccagc
gtgcgctggtcgatggcggatgcgatggagcaggagaaggaggcgttcggcttctatttc
tccgcccacccggtcgaccgccacgcgcatctcgccaagatgcatggcgcgcgccaatat
gtcgcgctgaccgagctcaacatccccgaggacggcacccgcgccggcgcgacgatggcg
gtgctggtcgaggatgcgcgttggcgcacctcggcgcgcggcaagcggtacatgatggcg
accttgtccgacgcgagcggccagttcgtcgccacctgtttcgacgattcggtcgccgcc
gagctggaggatgccgcgcgttgcggcggctgcggcctcatcaccgtggagctcgaccgc
cggcccggcgaggagacgccgcgcgtctcggtgaagcgcatccagccgttcgaggggctc
gcctcgatcgcgcgcttcaccatcgccgccagggtggcgcatgtcaccgccttcgaggcg
ctgtcggcgctgctcgcgcatcatcgtggcgctcgcggcgaggtgcgtgcgcatatcccg
gtcggggagggcgaggcgacggtgctgctcggtcgcgacttcctgctcgacatggaattg
gtcgagacgatccaggcgattcccggcatcagcgacgtcgcgctcgaccgcgtcgcctcg
cagcttcgttcggtgggctga
DBGET
integrated database retrieval system
