KEGG   Sphingomonas taxi: MC45_06520
Entry
MC45_06520        CDS       T03398                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
stax  Sphingomonas taxi
Pathway
stax03410  Base excision repair
stax03430  Mismatch repair
stax03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:stax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MC45_06520
   03430 Mismatch repair
    MC45_06520
   03440 Homologous recombination
    MC45_06520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stax03400]
    MC45_06520
DNA repair and recombination proteins [BR:stax03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     MC45_06520
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     MC45_06520
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MC45_06520
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB DUF7739
Other DBs
NCBI-ProteinID: AIT06100
UniProt: A0A097EEV9
LinkDB
Position
complement(1455859..1457613)
AA seq 584 aa
MTPVLGVSHSILGQPWHWRSLAADARDGFGADDLVTQLLLARGAERETLDQHRAPSIRAF
MPDPSVFRDMDRAAIRLADAVQAGESVAVFGDYDVDGATSAALMILVLRDLGLEARPYIP
DRLLEGYGPSGDALVRLAGEGASLIVTVDCGAQAFEALAMAHAHPVDVVVVDHHKCAAAL
PLAHALVNPNRLDEDEGAAHGHLAAVGVCFLLAAALLRTLEARGFFADRPKPNLIHHLDI
VALGTVADVAQLRGLNRAFVAQGLKVMAQRRNVGLAALIEASRLTRAPTCSDLGFALGPR
INAGGRVGRADLGVRLLTTRDPDEARAIAEELDRLNEERRLIEAGVQQAAELLANDGRRV
VVVSGEGWHPGVIGIVAGRLKEKFGRPAIVIAIGEDGLGKGSGRSIAGVDLGAAVLAAKE
QGLLVAGGGHAMAAGLTIAADGIAAFADFLEERLAAGVDRAIGERALLVDAVLAPGGINP
LLVESLDVGGPYGMGWPAPRIAAGPVRIIKADVVGSGHVRAVVAGDDGRSFKAVAFRAAD
TALGQALLAAAPHRRLWLAGRARIDDWGSRPAAEMHLEDAAWAN
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgacccccgttctcggcgtatcgcattcgattctcggccagccctggcattggcgcagc
ctcgccgccgacgcgcgcgacggtttcggtgccgacgatctcgtcacgcaattgctgctc
gcccgcggcgccgagcgcgagacgctcgaccagcatcgcgcgccgtcgatccgcgccttc
atgcccgacccgtcggtgttccgcgacatggaccgcgccgcgatccgcctcgccgatgcg
gtgcaggcgggcgagagcgtcgcggtgttcggcgattacgatgtcgacggcgcgacctcg
gcggcgctgatgatcctcgtgctgcgcgatctcgggctcgaggcgcggccgtacattccc
gaccggttgctcgaaggctatggcccgtcgggcgacgcgctggtccggctggcgggggag
ggggcgtcgctgatcgtcaccgtcgactgcggcgcacaggcgttcgaggcgctggcgatg
gcgcacgcgcatccggtcgacgtcgtcgtcgtcgaccaccacaaatgcgccgccgcgctg
ccgctggcgcatgcgctggtcaatcccaaccggctcgacgaggacgaaggcgcggcgcac
ggccatctcgccgcggtcggcgtctgctttctactggccgcggcgctgctgcgcacgctg
gaggcacgcggcttcttcgccgatcggcccaagcccaatctgatccaccatctcgacatc
gtcgcgctcggcaccgtcgccgacgtcgcgcagctgcgcggcctcaaccgcgccttcgtc
gctcaggggctcaaggtgatggcgcagcgccgcaacgtcggcctcgccgcgttgatcgag
gcgtcgcggctgacgcgcgcgccgacgtgcagcgacctcggcttcgcgctcgggccgcgg
atcaacgccggcggccgggtgggccgcgcggatctaggcgtgcggctgctcaccacgcgc
gatcccgacgaggcgcgcgcgatcgcggaggaactcgaccggctcaacgaggagcgccgc
ctgatcgaggcgggggtgcagcaagccgccgagctgctcgccaacgacggccgccgcgtc
gtcgtcgtctccggcgagggctggcatcccggcgtgatcggcatcgtcgccggacggctg
aaggagaagttcggccggccggcgatcgtcatcgcgatcggcgaggacgggctcggcaaa
ggctcaggccggtcgatcgccggggtcgatctcggcgcggcggtgctcgcggcgaaggag
cagggcctgctcgtcgccggcggcggccatgcgatggcggcggggctgacgatcgccgcc
gacggcatcgccgccttcgccgatttcctcgaagagcggctggccgccggcgtcgaccgc
gcgatcggtgagcgcgcgttgctggtcgacgcggtgctcgcgcccggcgggatcaacccg
ctgctggtcgaatcgctcgatgtcggcggaccgtacggcatgggctggccggcgccgcgg
atcgccgccgggccggtgcggatcatcaaggcggacgtcgtcggcagcggccacgtccgc
gcggtggtggcgggcgacgacggccgcagcttcaaggcggtggcgttccgcgccgccgac
accgcgctggggcaggcgctgctcgccgccgcgccgcaccgccggctatggctcgccggc
cgcgccaggatcgacgattggggcagccgcccggcggcggaaatgcacctggaagacgcc
gcctgggcgaattga

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