Sphingomonas taxi: MC45_06840
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Entry
MC45_06840 CDS
T03398
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
stax
Sphingomonas taxi
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stax03032
]
MC45_06840
03400 DNA repair and recombination proteins [BR:
stax03400
]
MC45_06840
Enzymes [BR:
stax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MC45_06840
DNA replication proteins [BR:
stax03032
]
Prokaryotic type
DNA Topoisomerases
MC45_06840
DNA repair and recombination proteins [BR:
stax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MC45_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Urocanase_C
Motif
Other DBs
NCBI-ProteinID:
AIT06155
UniProt:
A0A097EF12
LinkDB
All DBs
Position
1524841..1525857
Genome browser
AA seq
338 aa
AA seq
DB search
MAARIVYCDDSKPGITRKKVRNGWAYFAPDGTRITDRDEIDRLNAVGLPPAYRDAWYCPR
ANGHIQGIGWDEKGRKQYRYHTGFREAQEAAKYEKCADFGLCLPKIRKRVEADLSARGLG
KDRAIAAVVRLLDIGHIRVGNEAYAEANESYGATTLRKDHGSVRGDTLKLRYKGKSGKER
DMQVTDKRLAATVKKMQDLDEQHLFAWVDDAGEAHPVTSSDVNDYIRRAGGGDFTAKHFR
TWGASVTAFEALASAEADLSLKALLEPVVARLGNTPAIARKSYVHPSLIDLVKKGQSAFR
KALRLPRSARYLSREERGLIAFLEAGTPAALPVLKAAA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgcgaatagtctattgcgacgactcgaaacccggcatcacccgcaagaaggtg
cgcaacggctgggcctatttcgcccccgacggcacccgcatcaccgaccgcgacgagatc
gaccggctcaacgccgtcggcctgccccccgcctatcgcgacgcctggtattgcccgcgc
gccaacggccatatccagggaatcggctgggacgagaagggtcgcaagcaatatcgctac
cacaccggcttccgcgaggcgcaggaggcggcgaaatacgagaaatgcgccgatttcggc
ctttgcctgccgaaaatccgcaagcgggtggaagccgatctgtccgcgcgcggcctgggc
aaggaccgcgcgatcgccgcggtcgtccggctgctcgacatcggccatatccgcgtcggc
aacgaagcctatgccgaggcgaacgagagctacggcgcgaccacgctgcgcaaggatcac
ggcagcgtccgcggcgacacgctcaagctgcgctacaagggcaagtcgggcaaggagcgc
gacatgcaggtcaccgacaagcgcctcgccgccaccgtcaagaagatgcaggatctcgac
gaacagcatctgttcgcctgggtcgacgatgccggcgaggcgcatccggtcacctcgtcc
gacgtcaacgactatatccgccgcgccggcggcggcgacttcaccgccaagcatttccgc
acctggggcgccagcgtcaccgcgttcgaggcgctcgcctcggccgaggccgatctcagc
ctcaaggcgttgctcgaacccgtcgtcgcgcggctcggcaacacgccggcgatcgcgcgc
aagagctacgttcacccctcgctcatcgacctcgtgaaaaaggggcagagcgccttccgc
aaggcgctccgcctgccgcgctcggcgcgttatctcagccgcgaggaacgcggcctcatc
gcgttcctcgaagcgggaacgccggccgcgctgcccgtcctcaaggccgccgcctga
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