Sphingomonas taxi: MC45_08480
Help
Entry
MC45_08480 CDS
T03398
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
stax
Sphingomonas taxi
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stax03032
]
MC45_08480
03036 Chromosome and associated proteins [BR:
stax03036
]
MC45_08480
03400 DNA repair and recombination proteins [BR:
stax03400
]
MC45_08480
DNA replication proteins [BR:
stax03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MC45_08480
Chromosome and associated proteins [BR:
stax03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MC45_08480
DNA repair and recombination proteins [BR:
stax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MC45_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
VWA_3
CobT_C
Motif
Other DBs
NCBI-ProteinID:
AIT06397
UniProt:
A0A097EFQ2
LinkDB
All DBs
Position
complement(1890186..1890458)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELIATVADTSGLAKGDAIKAVEAVFDAITDSLKKGDEVRLVGFGTFSVSKRKASQG
RNPRTLEPMTIKASNQPKFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaagagctgatcgcgacggtcgcggacacctcggggctcgccaagggcgat
gcgatcaaggcggtggaagcggtcttcgatgcgatcaccgacagcttgaagaagggcgac
gaggttcgtctggtggggttcggcaccttctccgtctccaagcgcaaggcgtcgcagggc
cgcaatccccgcacgctggagccgatgacgatcaaggcgtccaaccagcccaagttcaag
gccggcaagggcctgaaagattcggtgaactga
DBGET
integrated database retrieval system
