Sphingomonas taxi: MC45_11175
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Entry
MC45_11175 CDS
T03398
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
stax
Sphingomonas taxi
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stax03019
]
MC45_11175
03009 Ribosome biogenesis [BR:
stax03009
]
MC45_11175
03036 Chromosome and associated proteins [BR:
stax03036
]
MC45_11175
Enzymes [BR:
stax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MC45_11175
Messenger RNA biogenesis [BR:
stax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MC45_11175
Ribosome biogenesis [BR:
stax03009
]
Eukaryotic type
90S particles
RNase
MC45_11175
Prokaryotic type
rRNA processing factors
MC45_11175
Chromosome and associated proteins [BR:
stax03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MC45_11175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AIT08178
UniProt:
A0A097EKT1
LinkDB
All DBs
Position
complement(2460483..2461151)
Genome browser
AA seq
222 aa
AA seq
DB search
MSIALPEWLTETFGRRPADIAPYQRALTHGSQAAENYERLEFLGDRVLGLVMAEWLWELF
PKEPEGQLSKRLNALVTGTVCADVARELGVRAHLRLGKQARDDGAYESDNILGDVMEALI
GAWYREAGLDAARAFVRKAWGHRVQHGDKAPQHPKSALQEWAAAAGRRTPEYVVVDRSGP
HHAPRFTVQVKIGSFADATATGANKQIAETAAAKALLEKLQG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ctgagcatcgcgctgcccgaatggctgaccgagaccttcggccgccgccccgccgacatc
gcgccctatcaacgcgcgctgacccacggcagccaggcggcggagaattacgagcggctc
gaattcctcggcgaccgcgtcctcggcctcgtcatggcggaatggctgtgggagctcttc
cccaaggagcccgagggacaattgtcgaagcggctcaacgcgctggtcaccggcacggtg
tgcgccgacgtcgcgcgcgagctgggcgtgcgcgcgcatctgcgcctcggcaaacaggcg
cgcgacgacggtgcctatgagagcgacaatatcctcggcgacgtgatggaggcgctgatc
ggcgcctggtatcgcgaggccgggctcgacgccgcacgcgccttcgtccgcaaggcctgg
ggccatcgtgtccagcacggcgacaaggcgccgcagcatcccaaatcggcattgcaggaa
tgggcggcggcggccggccggcgcaccccggaatatgtcgttgtcgaccgctccggcccg
caccatgcgccgcgcttcaccgtacaggtgaagatcggcagcttcgcggacgcgaccgcg
accggcgcgaacaagcagatcgcggagacggccgcggcaaaagcgctgctggagaagctc
caggggtga
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integrated database retrieval system
