Sphingomonas taxi: MC45_11705
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Entry
MC45_11705 CDS
T03398
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stax
Sphingomonas taxi
Pathway
stax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MC45_11705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stax03021
]
MC45_11705
03400 DNA repair and recombination proteins [BR:
stax03400
]
MC45_11705
Enzymes [BR:
stax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MC45_11705
Transcription machinery [BR:
stax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MC45_11705
DNA repair and recombination proteins [BR:
stax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MC45_11705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
AIT06933
UniProt:
A0A097EH90
LinkDB
All DBs
Position
2575927..2576994
Genome browser
AA seq
355 aa
AA seq
DB search
MSVNAKNWQELKKPNGLEKKGGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TSIKIENVLHEFSSLAGVREDVTDIVLNVKQIAIRMQGEGPKRLQLSATGPGEVKAGDIA
VSGDIEVMNPELVLCHLDEGATLNMELTADIGKGYVPATANRPADAPIGLIPVDALYSPV
RQVSYKVDPTRVGQDLDYDKLTLTIETDGTVTPEDAVAYAGRILQDQLALFVHFDDSAIT
RSSAPIGQAAAPAAGGDAAGDTQQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVGK
TEAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcaatgcaaagaactggcaggaactgaagaagcccaacggccttgagaaaaag
ggcggcgacggcaagcggaaggcgaccttcgtggccgagccgctggagcgtggcttcggc
ctgacgctcggcaacgcgctgcgtcgcgtgctgctctcctcgctgcagggcgcggccgtg
acctcgatcaagatcgagaacgtgctgcacgaattctccagcctggcgggcgtccgcgag
gacgtcaccgacatcgttctgaacgtcaagcagatcgcgatccgcatgcagggcgagggg
ccgaagcgcctccagctctcggcgaccggccccggcgaagtcaaggccggcgacatcgcc
gtgtcgggcgacatcgaggtgatgaaccccgagctggtgctgtgccacctcgacgaaggc
gcgacgctcaacatggagctgaccgccgacatcggtaagggctacgtccccgcgaccgcc
aaccgtccggccgatgcgccgatcggcctgatcccggtcgacgcgctctattcgccggtg
cgccaggtgtcgtacaaggtcgacccgacccgcgtcggtcaggacctcgattacgacaag
ctgacgctgacgatcgaaaccgacggcaccgtgacgcccgaggatgcggtggcctatgcc
ggtcgtatcctgcaggaccagctggcgctgttcgttcacttcgacgattcggcgatcacc
cgttcgtccgcgccgatcggccaggcggccgctccggcggctggcggcgacgcggccggc
gacacgcagcagatcaatcgttacctgctcaagaaggtcgacgagctcgaactgtcggtg
cgttcggccaactgcctcaagaacgacaacatcatctacatcggtgacctggtcggcaag
accgaggccgagatgctccggaccccgaacttcggccgtaagtcgttgaacgagatcaag
gaagttctctcgtccatgggcctgcgcctcggcatggaaatcccgggctggccgcccgag
aacatcgaagagatggcgaagaagctcgagcaggaaattatggggtga
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