KEGG   Sphingomonas taxi: MC45_12565
Entry
MC45_12565        CDS       T03398                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
stax  Sphingomonas taxi
Pathway
stax02020  Two-component system
stax02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:stax00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MC45_12565
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MC45_12565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stax03021]
    MC45_12565
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:stax02035]
    MC45_12565
Transcription machinery [BR:stax03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MC45_12565
Bacterial motility proteins [BR:stax02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    MC45_12565
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 Sigma70_ECF
Other DBs
NCBI-ProteinID: AIT07073
UniProt: A0A097EHN0
LinkDB
Position
2749037..2749816
AA seq 259 aa
MSMEPMKQVFAPATPAPATLVPQGPLTYSRVTRPGGDQEAMIRQYLPLVRRIAWHVHGSM
SSIVEVEDLVQIGLVALVEAIGQAAEQGAQFRAYLQTRLRGAMIDELRRQATTTRGAMRR
RRQYHAAVATLTASTGRAPDEAALAKELGVTVEKLRADYETADAVRFESMDEVYADDLPW
FADDTPDAFEQLAESDLRDTLIAAITALPEREALVVQLFYVEELNLEEIGQVIGVGAARV
CQIKAAAHAKLKKALARKV
NT seq 780 nt   +upstreamnt  +downstreamnt
atgagcatggagccgatgaaacaggtgttcgcccccgccacgcccgcgcccgccacgctg
gtgccgcaaggaccgctcacctattcgcgcgtcacccgcccgggcggcgatcaggaggcg
atgatccggcaatatctgccgctggtccgccgcatcgcgtggcacgtccacggttcgatg
agctcgatcgtcgaggtcgaggatctcgtccagatcggcctcgtcgcgctggtcgaggcg
atcggccaggccgccgaacagggcgcgcaattccgcgcctatctgcaaacccggctgcgc
ggcgcgatgatcgacgaattgcggcgtcaggcgacgacgacgcgcggcgcgatgcggcgg
cggcggcaatatcatgccgcggtggcaacgctgacggcaagcaccggccgcgcccccgac
gaggcggcgctggcgaaggaactgggagtgacggtggagaaactgcgcgccgattacgag
accgccgatgcggtccggttcgaatcgatggacgaggtctatgccgacgatctgccgtgg
ttcgccgacgacacgcccgacgccttcgagcagctcgcggaaagcgacctgcgcgacacg
ctgatcgccgcgatcaccgcgctgcccgagcgcgaggcgctggtggtgcagctcttctac
gtcgaggaactcaacctcgaggagatcggccaggtgatcggcgtcggcgcggcgcgcgtc
tgccagatcaaggccgccgcacatgcgaagttgaagaaggccctggcacggaaggtataa

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