Sphingomonas taxi: MC45_13370
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Entry
MC45_13370 CDS
T03398
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
stax
Sphingomonas taxi
Pathway
stax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MC45_13370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stax03021
]
MC45_13370
03400 DNA repair and recombination proteins [BR:
stax03400
]
MC45_13370
Enzymes [BR:
stax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MC45_13370
Transcription machinery [BR:
stax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MC45_13370
DNA repair and recombination proteins [BR:
stax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MC45_13370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AIT07191
UniProt:
A0A097EI01
LinkDB
All DBs
Position
complement(2942039..2942383)
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKIPNRFDLVLFAAQRARQISGGAELLLDRDRDKNPVVALREIADELVRP
DNLEEAVINSLQRVQIDDDDEVDAVGSLSASAEALRLTAAAPPRNQNLGADYDG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtcactgtcgaggattgcgtcgacaagatccccaaccgcttcgatctggtc
ctgttcgccgcacagcgtgcgcgacagatttcgggcggcgcagaactgctgctcgatcgc
gatcgcgacaagaatccggtcgtcgcgctgcgcgagatcgccgacgagctggtccgcccg
gacaatctcgaagaggcggtgatcaacagcctgcagcgcgtccagatcgacgacgacgat
gaggtcgatgcggtcggctcgctgtcggcctcggccgaggcgctccgcctgaccgccgcc
gcgccgccgcggaaccagaatctgggtgccgattacgacgggtga
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