Streptococcus pasteurianus: SGPB_0209
Help
Entry
SGPB_0209 CDS
T01524
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stb
Streptococcus pasteurianus
Pathway
stb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGPB_0209 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stb03019
]
SGPB_0209 (pnpA)
03016 Transfer RNA biogenesis [BR:
stb03016
]
SGPB_0209 (pnpA)
Enzymes [BR:
stb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SGPB_0209 (pnpA)
Messenger RNA biogenesis [BR:
stb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SGPB_0209 (pnpA)
Transfer RNA biogenesis [BR:
stb03016
]
Prokaryotic type
tRNA degradation factors
SGPB_0209 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
KH_2
S1_RRP5
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
BAK29343
UniProt:
F5X4K3
LinkDB
All DBs
Position
218740..220923
Genome browser
AA seq
727 aa
AA seq
DB search
MSKQTFETTFAGRPLVVEIGQVAKQANGAAVVRYGESTILSAAVMSKKMSTGDFFPLQVN
YEEKMYAAGKFPGGFNKREGRPTTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
DASAPMAAMFGSSLALSISDIPFNGPIAGVQVAYIDGEFIINPSAAQKEASLLELTVAGT
KDAINMVESGAKELSEDIMLEALLKGHEAVRELIAFQEEIVAAVGKEKAEVELLQVDPEL
QAEIIAAYNADLQKAVQVEEKKAREAATEAVKEQVIAVYEERYADDENYETIMRDVAEIL
EQMEHAEVRRLITEDKIRPDGRRVDEIRPLDAEIDYLPKVHGSGLFTRGQTQALSVLTLA
PMGETQIVDGLDPEYKKRFLHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNYTI
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITPQILKEALAQAKKARFEILDLI
EATIPAPRAQLAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIEETGVKIDIDDEGNVSI
YSSDQAAIDRTKEIIAGLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEISWS
RTANVSDVLEVGEEVDVKVIKVDDKGRVDASMKALLPRPPRSEKEYKEHSPFGGYLRDRK
EKHDKID
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaacttttgaaacaacttttgctggcagaccacttgttgttgagattggt
caagttgctaaacaagccaatggcgctgctgtggtacgttatggtgaatcaaccattctt
agtgcagctgtcatgtctaagaagatgtcaacaggtgactttttcccacttcaagttaac
tatgaagaaaaaatgtatgcagctggaaaattccctggtggtttcaataaacgtgaagga
cgcccaacgactgatgcgactttgacagcgcgtttgattgaccgtccgattcgtccaatg
tttgcagaaggcttccgtaatgaagttcaagtgattaataccgttctctcttacgatgaa
gatgctagtgcgccaatggcggctatgtttggtagttcacttgctttatctatctcagat
attccatttaacggacctattgcaggcgttcaagtagcttacattgacggtgaatttatt
atcaatccgtcagctgcacaaaaagaagcatcacttcttgagttgactgtggctggtaca
aaagatgccattaatatggttgagtctggtgccaaagaattgtcagaagacatcatgctt
gaagcgcttcttaaagggcacgaagctgttcgtgaactgattgctttccaagaagaaatc
gtcgcagctgttggtaaagaaaaagctgaggttgaattgcttcaagttgacccagaattg
caagctgaaattattgcagcttataacgctgaccttcaaaaagcagttcaagttgaagag
aaaaaagcgcgtgaagcagcgacagaagctgtgaaagaacaagtcattgctgtttacgaa
gaacgctacgctgacgatgaaaattacgaaactatcatgcgtgacgttgctgaaatcctt
gaacaaatggaacatgcggaagtccgtcgcttgattactgaagacaaaattcgtcctgat
ggtcgtcgtgttgatgaaattcgtccattggatgctgaaattgattatttaccaaaagtt
cacggttcaggtcttttcacacgtggacaaacacaagcattatcagttttgacccttgct
ccaatgggagaaacacaaattgttgacggtcttgacccagaatacaagaaacgtttctta
catcactacaatttcccacaatattcagttggtgaaacaggacgctatggcgctccaggt
cgccgtgaaatcggtcatggtgcccttggtgaacgtgctcttgcacaagttcttcctagc
ttagaagaatttccatatgcaatccgtcttgtagctgaagtattggaatcaaatggttca
tcttcacaagcttcaatctgtgcgggtactcttgctcttatggctggtggtgtaccaatc
aaagctccagtagcaggtattgccatgggattaatttcagacggtagcaattacacaatc
ttgacagacattcaaggtcttgaggatcactttggtgatatggactttaaagttgctggt
acacgtgaaggaattacagcgcttcaaatggatattaagattgaaggaatcacccctcaa
atcttaaaagaagctcttgctcaagctaaaaaagctcgttttgaaatccttgatttgatt
gaagcaactatcccagcaccacgtgctcaattggctccaacagcaccaaaaattgataca
atcaagattgacgttgataaaatcaaagttgtcatcggtaaaggtggcgaaacgattgat
aaaattatcgaagaaactggtgttaaaatcgatattgacgatgaaggaaatgtatctatt
tattcatctgaccaagctgcaattgaccgcacaaaagaaatcattgctggtttagttcgc
gaggctaaagttggtgaagtttaccatgccaaagttgttcgtattgaaaaattcggtgcg
tttgttaatctctttgataaaacagatgcccttgttcacatttcagaaatttcatggtca
cgtacggctaatgtttctgatgttttagaagtcggtgaagaagtcgatgttaaagtcatt
aaagttgatgataaaggtcgcgttgatgcttcaatgaaggctttgttaccacgtccacca
agatctgagaaagaatacaaagaacattcaccatttggtggatacttgcgtgatcgtaaa
gaaaagcatgacaaaatcgactga
DBGET
integrated database retrieval system
