Streptococcus pasteurianus: SGPB_0543
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Entry
SGPB_0543 CDS
T01524
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
stb
Streptococcus pasteurianus
Pathway
stb03030
DNA replication
stb03430
Mismatch repair
stb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGPB_0543 (holA)
03430 Mismatch repair
SGPB_0543 (holA)
03440 Homologous recombination
SGPB_0543 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stb03032
]
SGPB_0543 (holA)
03400 DNA repair and recombination proteins [BR:
stb03400
]
SGPB_0543 (holA)
Enzymes [BR:
stb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGPB_0543 (holA)
DNA replication proteins [BR:
stb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGPB_0543 (holA)
DNA repair and recombination proteins [BR:
stb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGPB_0543 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BAK29653
UniProt:
F5X5G3
LinkDB
All DBs
Position
564396..565457
Genome browser
AA seq
353 aa
AA seq
DB search
MVFCYNISMIAIEEIDKLRKENLSLITVVTGEDLGQFSQLKERMMARVGYDKDDLTYSYF
DMAEVDYQDAEMDLESLPFFADQKVVIFDNLLDITTTKRSYLDDKALKRFEVYLENPLDT
TRLIIFAPGKLDGKRRLVKILKRDAQIFEASELKEAELKTYFRKLAHKENLTFDSGVFEA
LLLKSNYDFSEILKNIAFLKSYKKDGHITADDINQAIPKTLQDNIFDLTQFVLNGKIDEA
RELIRDLRLQGEDEIKLIAIMLGQFRMFLQVSILASQGKNEQQTVTALSDYLGRRVNPYQ
VKFALRDSRTLSMPFLKKALAVLIETDYAIKTGTYDKAYLFDIAILKIAHEHH
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggttttttgttataatatttctatgattgcaatcgaagaaattgataaattacgaaaa
gaaaatcttagtttgattacggtggtgacgggtgaggatttgggacaattttctcagctg
aaagaacgtatgatggcacgtgttggttatgataaggatgacttgacttattcttatttt
gatatggctgaggttgattatcaagatgcggaaatggaccttgaaagtctgccatttttt
gctgaccaaaaggtggttatttttgataatttactcgacatcacgacaactaagaggtct
tatttggatgataaggcactcaaacgttttgaggtatatttggaaaatcccttggacacg
acgcgcttgattatttttgcgccagggaaattagacggcaaacgtcgcttggtgaaaatt
cttaaacgtgatgcacagatttttgaagcaagtgaattaaaagaagcagagctaaaaacg
tatttccgaaaattggctcacaaagaaaatctgacctttgattcaggtgtttttgaggct
ttgcttttgaaatccaattatgatttcagtgagattttgaaaaacattgcttttttgaaa
tcttataaaaaagatggtcatatcacggcagatgatattaatcaagccattccaaaaacg
cttcaggataatattttcgacttgacgcagtttgttttgaatggcaaaatcgatgaggcg
cgcgagctgattcgtgatttgcgtttgcaaggtgaggatgaaatcaaattgattgcgatt
atgttagggcagtttcgcatgttcttgcaagtcagcattttagccagtcaaggtaaaaat
gaacaacaaactgtaacggcgctgtcagattatcttggacgtcgtgtcaatccttatcaa
gttaagtttgctttgcgtgactctcgtacgctttcaatgccgttcttgaaaaaagctttg
gcggtgttgattgaaacggattatgccattaaaactgggacatatgacaaggcttattta
tttgatattgctatcttaaaaatcgctcacgaacatcactaa
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